Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PRDM9Q9NQV7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PRDM9Q9NQV7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM9Q9NQV7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 AC096631.2-201ENST00000436136 790 ntBASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 AC009086.3-201ENST00000623486 1008 ntBASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 AL353803.4-201ENST00000565882 1934 ntBASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PRDM9Q9NQV7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRDM9Q9NQV7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 SYT6-210ENST00000641643 1587 ntBASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.03■□□□□ 0.96
PRDM9Q9NQV7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 UNC93B3-201ENST00000308076 687 ntBASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 AL139246.5-201ENST00000606645 996 ntBASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM9Q9NQV7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRDM9Q9NQV7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.95
PRDM9Q9NQV7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.01■□□□□ 0.95
PRDM9Q9NQV7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRDM9Q9NQV7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21■□□□□ 0.95
PRDM9Q9NQV7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21■□□□□ 0.95
PRDM9Q9NQV7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRDM9Q9NQV7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRDM9Q9NQV7 AC006455.2-201ENST00000429931 906 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms