Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.62■□□□□ 0.89
VRK2Q86Y07 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VRK2Q86Y07 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.62■□□□□ 0.89
VRK2Q86Y07 AC239859.2-201ENST00000444165 318 ntBASIC20.62■□□□□ 0.89
VRK2Q86Y07 Z92544.1-202ENST00000571933 1220 ntBASIC20.62■□□□□ 0.89
VRK2Q86Y07 MIR4787-201ENST00000607364 84 ntBASIC20.62■□□□□ 0.89
VRK2Q86Y07 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VRK2Q86Y07 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VRK2Q86Y07 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VRK2Q86Y07 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VRK2Q86Y07 AC009299.2-201ENST00000482477 511 ntBASIC20.61■□□□□ 0.89
VRK2Q86Y07 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VRK2Q86Y07 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.61■□□□□ 0.89
VRK2Q86Y07 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
VRK2Q86Y07 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
VRK2Q86Y07 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VRK2Q86Y07 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 AL451085.2-201ENST00000605085 799 ntBASIC20.6■□□□□ 0.89
VRK2Q86Y07 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
VRK2Q86Y07 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VRK2Q86Y07 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
VRK2Q86Y07 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VRK2Q86Y07 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.59■□□□□ 0.89
VRK2Q86Y07 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 EP400NL-214ENST00000641289 2402 ntBASIC20.59■□□□□ 0.89
VRK2Q86Y07 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK2Q86Y07 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VRK2Q86Y07 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VRK2Q86Y07 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.58■□□□□ 0.89
VRK2Q86Y07 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 GUSBP5-202ENST00000510805 1989 ntBASIC20.58■□□□□ 0.89
VRK2Q86Y07 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 MTDHP2-201ENST00000601468 714 ntBASIC20.58■□□□□ 0.89
VRK2Q86Y07 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VRK2Q86Y07 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.58■□□□□ 0.89
VRK2Q86Y07 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VRK2Q86Y07 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.58■□□□□ 0.88
VRK2Q86Y07 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VRK2Q86Y07 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.58■□□□□ 0.88
VRK2Q86Y07 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 TSPY9P-201ENST00000440215 945 ntBASIC20.57■□□□□ 0.88
VRK2Q86Y07 TSPY11P-201ENST00000442607 1045 ntBASIC20.57■□□□□ 0.88
VRK2Q86Y07 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK2Q86Y07 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VRK2Q86Y07 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VRK2Q86Y07 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VRK2Q86Y07 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK2Q86Y07 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.55■□□□□ 0.88
VRK2Q86Y07 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms