Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 TPRG1LP1-201ENST00000598702 760 ntBASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC34.35■■■■□ 3.09
CDC42BPAQ5VT25 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
CDC42BPAQ5VT25 DUX4L4-201ENST00000566884 1269 ntBASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDC42BPAQ5VT25 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.32■■■■□ 3.09
CDC42BPAQ5VT25 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.32■■■■□ 3.09
CDC42BPAQ5VT25 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CDC42BPAQ5VT25 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.32■■■■□ 3.08
CDC42BPAQ5VT25 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.32■■■■□ 3.08
CDC42BPAQ5VT25 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CDC42BPAQ5VT25 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 AC144652.1-201ENST00000609974 1624 ntBASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.31■■■■□ 3.08
CDC42BPAQ5VT25 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 FP325331.1-202ENST00000623531 1380 ntBASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC34.3■■■■□ 3.08
CDC42BPAQ5VT25 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPAQ5VT25 ID1-201ENST00000376105 1233 ntBASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 AP005435.1-201ENST00000529293 1178 ntBASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC34.28■■■■□ 3.08
CDC42BPAQ5VT25 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.27■■■■□ 3.08
CDC42BPAQ5VT25 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.08
CDC42BPAQ5VT25 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPAQ5VT25 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.26■■■■□ 3.07
CDC42BPAQ5VT25 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPAQ5VT25 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPAQ5VT25 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPAQ5VT25 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDC42BPAQ5VT25 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC34.25■■■■□ 3.07
CDC42BPAQ5VT25 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC34.25■■■■□ 3.07
CDC42BPAQ5VT25 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDC42BPAQ5VT25 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 TMEM202-AS1-202ENST00000565181 2325 ntBASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.24■■■■□ 3.07
CDC42BPAQ5VT25 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
CDC42BPAQ5VT25 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CDC42BPAQ5VT25 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.23■■■■□ 3.07
CDC42BPAQ5VT25 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
CDC42BPAQ5VT25 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
CDC42BPAQ5VT25 RAP2CP1-201ENST00000605103 478 ntBASIC34.23■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms