Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YGL262WYGL262W 528 nt5.72□□□□□ -1.49
SSM4P40318 PPA2YMR267W 933 nt5.72□□□□□ -1.49
SSM4P40318 UPC2YDR213W 2742 nt5.71□□□□□ -1.49
SSM4P40318 MET3YJR010W 1536 nt5.71□□□□□ -1.5
SSM4P40318 RSM23YGL129C 1353 nt5.71□□□□□ -1.5
SSM4P40318 LTV1YKL143W 1392 nt5.71□□□□□ -1.5
SSM4P40318 PHO84YML123C 1764 nt5.71□□□□□ -1.5
SSM4P40318 YDR133CYDR133C 336 nt5.71□□□□□ -1.5
SSM4P40318 AHA1YDR214W 1053 nt5.71□□□□□ -1.5
SSM4P40318 ARN2YHL047C 1863 nt5.71□□□□□ -1.5
SSM4P40318 CTF18YMR078C 2226 nt5.7□□□□□ -1.5
SSM4P40318 ROD1YOR018W 2514 nt5.7□□□□□ -1.5
SSM4P40318 PPQ1YPL179W 1650 nt5.7□□□□□ -1.5
SSM4P40318 PTA1YAL043C 2358 nt5.7□□□□□ -1.5
SSM4P40318 VPS36YLR417W 1701 nt5.7□□□□□ -1.5
SSM4P40318 NBP2YDR162C 711 nt5.7□□□□□ -1.5
SSM4P40318 BUR6YER159C 429 nt5.7□□□□□ -1.5
SSM4P40318 YFR035CYFR035C 345 nt5.7□□□□□ -1.5
SSM4P40318 SNF8YPL002C 702 nt5.7□□□□□ -1.5
SSM4P40318 TUL1YKL034W 2277 nt5.69□□□□□ -1.5
SSM4P40318 SET4YJL105W 1683 nt5.69□□□□□ -1.5
SSM4P40318 UBP7YIL156W 3216 nt5.69□□□□□ -1.5
SSM4P40318 RTN1YDR233C 888 nt5.69□□□□□ -1.5
SSM4P40318 YKR104WYKR104W 921 nt5.69□□□□□ -1.5
SSM4P40318 FLD1YLR404W 858 nt5.69□□□□□ -1.5
SSM4P40318 DSC2YOL073C 969 nt5.69□□□□□ -1.5
SSM4P40318 GAS3YMR215W 1575 nt5.68□□□□□ -1.5
SSM4P40318 YCF1YDR135C 4548 nt5.68□□□□□ -1.5
SSM4P40318 PRE9YGR135W 777 nt5.68□□□□□ -1.5
SSM4P40318 CDC12YHR107C 1224 nt5.68□□□□□ -1.5
SSM4P40318 PSR1YLL010C 1284 nt5.68□□□□□ -1.5
SSM4P40318 YLR402WYLR402W 192 nt5.68□□□□□ -1.5
SSM4P40318 SRB6YBR253W 366 nt5.68□□□□□ -1.5
SSM4P40318 SIS2YKR072C 1689 nt5.68□□□□□ -1.5
SSM4P40318 YGR125WYGR125W 3111 nt5.67□□□□□ -1.5
SSM4P40318 DNF2YDR093W 4839 nt5.67□□□□□ -1.5
SSM4P40318 NCR1YPL006W 3513 nt5.67□□□□□ -1.5
SSM4P40318 KIC1YHR102W 3243 nt5.67□□□□□ -1.5
SSM4P40318 HIS5YIL116W 1158 nt5.67□□□□□ -1.5
SSM4P40318 PAU17YLL025W 375 nt5.67□□□□□ -1.5
SSM4P40318 VTA1YLR181C 993 nt5.67□□□□□ -1.5
SSM4P40318 YPL162CYPL162C 822 nt5.67□□□□□ -1.5
SSM4P40318 PIM1YBL022C 3402 nt5.67□□□□□ -1.5
SSM4P40318 ALG9YNL219C 1668 nt5.66□□□□□ -1.5
SSM4P40318 TOG1YER184C 2385 nt5.66□□□□□ -1.5
SSM4P40318 YIL028WYIL028W 399 nt5.66□□□□□ -1.5
SSM4P40318 BAT2YJR148W 1131 nt5.66□□□□□ -1.5
SSM4P40318 UIP3YAR027W 708 nt5.66□□□□□ -1.5
SSM4P40318 SPS18YNL204C 903 nt5.66□□□□□ -1.5
SSM4P40318 CDC21YOR074C 915 nt5.66□□□□□ -1.5
SSM4P40318 YBR056W-AYBR056W-A 201 nt5.66□□□□□ -1.5
SSM4P40318 MPC54YOR177C 1395 nt5.66□□□□□ -1.5
SSM4P40318 ATG1YGL180W 2694 nt5.66□□□□□ -1.5
SSM4P40318 MTR10YOR160W 2919 nt5.65□□□□□ -1.5
SSM4P40318 PCL9YDL179W 915 nt5.65□□□□□ -1.51
SSM4P40318 YGL152CYGL152C 678 nt5.65□□□□□ -1.51
SSM4P40318 ECM1YAL059W 639 nt5.65□□□□□ -1.51
SSM4P40318 YNL143CYNL143C 393 nt5.65□□□□□ -1.51
SSM4P40318 CKA2YOR061W 1020 nt5.65□□□□□ -1.51
SSM4P40318 RET3YPL010W 570 nt5.65□□□□□ -1.51
SSM4P40318 snR3snR3 194 nt5.65□□□□□ -1.51
SSM4P40318 SAS4YDR181C 1446 nt5.65□□□□□ -1.51
SSM4P40318 IBA57YJR122W 1494 nt5.65□□□□□ -1.51
SSM4P40318 MCX1YBR227C 1563 nt5.65□□□□□ -1.51
SSM4P40318 BBC1YJL020C 3474 nt5.65□□□□□ -1.51
SSM4P40318 NFI1YOR156C 2181 nt5.64□□□□□ -1.51
SSM4P40318 SEC39YLR440C 2130 nt5.64□□□□□ -1.51
SSM4P40318 SRP72YPL210C 1923 nt5.64□□□□□ -1.51
SSM4P40318 YDL094CYDL094C 510 nt5.64□□□□□ -1.51
SSM4P40318 GRE3YHR104W 984 nt5.64□□□□□ -1.51
SSM4P40318 YJL218WYJL218W 591 nt5.64□□□□□ -1.51
SSM4P40318 YKL169CYKL169C 384 nt5.64□□□□□ -1.51
SSM4P40318 SIW14YNL032W 846 nt5.64□□□□□ -1.51
SSM4P40318 MFA2YNL145W 117 nt5.64□□□□□ -1.51
SSM4P40318 CBP1YJL209W 1965 nt5.63□□□□□ -1.51
SSM4P40318 FKH1YIL131C 1455 nt5.63□□□□□ -1.51
SSM4P40318 ERV14YGL054C 417 nt5.63□□□□□ -1.51
SSM4P40318 YHR112CYHR112C 1137 nt5.63□□□□□ -1.51
SSM4P40318 YHR173CYHR173C 339 nt5.63□□□□□ -1.51
SSM4P40318 YPL073CYPL073C 486 nt5.63□□□□□ -1.51
SSM4P40318 NRG2YBR066C 663 nt5.63□□□□□ -1.51
SSM4P40318 CTR1YPR124W 1221 nt5.63□□□□□ -1.51
SSM4P40318 CYK3YDL117W 2658 nt5.62□□□□□ -1.51
SSM4P40318 UTP6YDR449C 1323 nt5.62□□□□□ -1.51
SSM4P40318 BIK1YCL029C 1323 nt5.62□□□□□ -1.51
SSM4P40318 YDL183CYDL183C 963 nt5.62□□□□□ -1.51
SSM4P40318 PFA5YDR459C 1125 nt5.62□□□□□ -1.51
SSM4P40318 MAG1YER142C 891 nt5.62□□□□□ -1.51
SSM4P40318 YLR124WYLR124W 345 nt5.62□□□□□ -1.51
SSM4P40318 NGL2YMR285C 1548 nt5.62□□□□□ -1.51
SSM4P40318 CHL1YPL008W 2586 nt5.61□□□□□ -1.51
SSM4P40318 DBF2YGR092W 1719 nt5.61□□□□□ -1.51
SSM4P40318 MIF2YKL089W 1650 nt5.61□□□□□ -1.51
SSM4P40318 LSM6YDR378C 261 nt5.61□□□□□ -1.51
SSM4P40318 ISA2YPR067W 558 nt5.61□□□□□ -1.51
SSM4P40318 VAN1YML115C 1608 nt5.61□□□□□ -1.51
SSM4P40318 USA1YML029W 2517 nt5.61□□□□□ -1.51
SSM4P40318 MEC3YLR288C 1425 nt5.6□□□□□ -1.51
SSM4P40318 snR57snR57 88 nt5.6□□□□□ -1.51
SSM4P40318 NVJ1YHR195W 966 nt5.6□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 42.9 ms