Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SFTPBP07988 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SFTPBP07988 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SFTPBP07988 DUSP8P3-201ENST00000399571 1760 ntBASIC19.27■□□□□ 0.67
SFTPBP07988 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SFTPBP07988 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SFTPBP07988 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.26■□□□□ 0.67
SFTPBP07988 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SFTPBP07988 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPBP07988 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SFTPBP07988 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.25■□□□□ 0.67
SFTPBP07988 MIR4787-201ENST00000607364 84 ntBASIC19.25■□□□□ 0.67
SFTPBP07988 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPBP07988 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.24■□□□□ 0.67
SFTPBP07988 AL117328.2-201ENST00000624617 1940 ntBASIC19.24■□□□□ 0.67
SFTPBP07988 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.24■□□□□ 0.67
SFTPBP07988 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.24■□□□□ 0.67
SFTPBP07988 AC137630.3-201ENST00000607245 391 ntBASIC19.24■□□□□ 0.67
SFTPBP07988 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.24■□□□□ 0.67
SFTPBP07988 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.24■□□□□ 0.67
SFTPBP07988 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPBP07988 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
SFTPBP07988 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.23■□□□□ 0.67
SFTPBP07988 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.23■□□□□ 0.67
SFTPBP07988 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.23■□□□□ 0.67
SFTPBP07988 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SFTPBP07988 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SFTPBP07988 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.23■□□□□ 0.67
SFTPBP07988 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SFTPBP07988 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPBP07988 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SFTPBP07988 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.22■□□□□ 0.67
SFTPBP07988 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.22■□□□□ 0.67
SFTPBP07988 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.22■□□□□ 0.67
SFTPBP07988 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.22■□□□□ 0.67
SFTPBP07988 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.22■□□□□ 0.67
SFTPBP07988 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPBP07988 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SFTPBP07988 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPBP07988 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.21■□□□□ 0.67
SFTPBP07988 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SFTPBP07988 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPBP07988 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.2■□□□□ 0.66
SFTPBP07988 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SFTPBP07988 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 AL356441.2-201ENST00000443009 864 ntBASIC19.2■□□□□ 0.66
SFTPBP07988 AC004448.1-201ENST00000458332 883 ntBASIC19.2■□□□□ 0.66
SFTPBP07988 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms