Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
FCF1Q9Y324 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
FCF1Q9Y324 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
FCF1Q9Y324 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FCF1Q9Y324 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.76■■□□□ 1.23
FCF1Q9Y324 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.76■■□□□ 1.23
FCF1Q9Y324 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FCF1Q9Y324 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FCF1Q9Y324 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
FCF1Q9Y324 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
FCF1Q9Y324 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 pRNA.6-201ENST00000610482 90 ntBASIC22.75■■□□□ 1.23
FCF1Q9Y324 pRNA.5-201ENST00000612139 90 ntBASIC22.75■■□□□ 1.23
FCF1Q9Y324 pRNA.11-201ENST00000618423 90 ntBASIC22.75■■□□□ 1.23
FCF1Q9Y324 pRNA.13-201ENST00000619112 90 ntBASIC22.75■■□□□ 1.23
FCF1Q9Y324 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
FCF1Q9Y324 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.75■■□□□ 1.23
FCF1Q9Y324 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.74■■□□□ 1.23
FCF1Q9Y324 MIR3181-201ENST00000578512 73 ntBASIC22.74■■□□□ 1.23
FCF1Q9Y324 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.74■■□□□ 1.23
FCF1Q9Y324 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FCF1Q9Y324 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FCF1Q9Y324 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FCF1Q9Y324 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FCF1Q9Y324 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.73■■□□□ 1.23
FCF1Q9Y324 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.73■■□□□ 1.23
FCF1Q9Y324 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.73■■□□□ 1.23
FCF1Q9Y324 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.73■■□□□ 1.23
FCF1Q9Y324 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
FCF1Q9Y324 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FCF1Q9Y324 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FCF1Q9Y324 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
FCF1Q9Y324 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
FCF1Q9Y324 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 FP325331.1-202ENST00000623531 1380 ntBASIC22.72■■□□□ 1.23
FCF1Q9Y324 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.72■■□□□ 1.23
FCF1Q9Y324 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FCF1Q9Y324 LINC01529-204ENST00000636474 1715 ntBASIC22.71■■□□□ 1.23
FCF1Q9Y324 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
FCF1Q9Y324 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.71■■□□□ 1.23
FCF1Q9Y324 MIR4767-201ENST00000582827 78 ntBASIC22.71■■□□□ 1.23
FCF1Q9Y324 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.71■■□□□ 1.23
FCF1Q9Y324 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.71■■□□□ 1.23
FCF1Q9Y324 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
FCF1Q9Y324 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
FCF1Q9Y324 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
FCF1Q9Y324 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.7■■□□□ 1.22
FCF1Q9Y324 DUX4L4-201ENST00000566884 1269 ntBASIC22.7■■□□□ 1.22
FCF1Q9Y324 AL138724.1-201ENST00000606771 1088 ntBASIC22.7■■□□□ 1.22
FCF1Q9Y324 AC005837.3-201ENST00000612163 286 ntBASIC22.7■■□□□ 1.22
FCF1Q9Y324 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.7■■□□□ 1.22
FCF1Q9Y324 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FCF1Q9Y324 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FCF1Q9Y324 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.7■■□□□ 1.22
FCF1Q9Y324 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FCF1Q9Y324 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FCF1Q9Y324 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
FCF1Q9Y324 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.69■■□□□ 1.22
FCF1Q9Y324 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.69■■□□□ 1.22
FCF1Q9Y324 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 AC133561.4-201ENST00000566112 224 ntBASIC22.69■■□□□ 1.22
FCF1Q9Y324 AC011298.3-201ENST00000615796 283 ntBASIC22.69■■□□□ 1.22
FCF1Q9Y324 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
FCF1Q9Y324 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
FCF1Q9Y324 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
FCF1Q9Y324 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 ANOS2P-203ENST00000472227 1816 ntBASIC22.68■■□□□ 1.22
FCF1Q9Y324 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FCF1Q9Y324 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FCF1Q9Y324 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FCF1Q9Y324 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.68■■□□□ 1.22
FCF1Q9Y324 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms