Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF6Q9Y252 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF6Q9Y252 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF6Q9Y252 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF6Q9Y252 AL117332.1-201ENST00000622628 974 ntBASIC20.97■□□□□ 0.95
RNF6Q9Y252 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF6Q9Y252 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF6Q9Y252 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF6Q9Y252 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF6Q9Y252 MIR638-201ENST00000385237 100 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF6Q9Y252 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF6Q9Y252 AL139246.5-201ENST00000606645 996 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 MIR6724-1-201ENST00000616420 92 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 MIR6724-2-201ENST00000616483 92 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 MIR6724-4-201ENST00000617390 92 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 MIR6724-3-201ENST00000622482 92 ntBASIC20.96■□□□□ 0.95
RNF6Q9Y252 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF6Q9Y252 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF6Q9Y252 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF6Q9Y252 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF6Q9Y252 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 AL136116.3-201ENST00000402907 1138 ntBASIC20.95■□□□□ 0.94
RNF6Q9Y252 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 FOXO3B-201ENST00000395675 1928 ntBASIC20.95■□□□□ 0.94
RNF6Q9Y252 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.94
RNF6Q9Y252 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RNF6Q9Y252 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF6Q9Y252 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF6Q9Y252 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF6Q9Y252 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF6Q9Y252 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF6Q9Y252 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF6Q9Y252 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF6Q9Y252 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 DUSP8P3-201ENST00000399571 1760 ntBASIC20.93■□□□□ 0.94
RNF6Q9Y252 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF6Q9Y252 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF6Q9Y252 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF6Q9Y252 MIR3621-201ENST00000580529 85 ntBASIC20.93■□□□□ 0.94
RNF6Q9Y252 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF6Q9Y252 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF6Q9Y252 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF6Q9Y252 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF6Q9Y252 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms