Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ABCB10P4-201ENST00000566803 2184 ntBASIC21.78■■□□□ 1.08
CPNE7Q9UBL6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE7Q9UBL6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE7Q9UBL6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 AC144652.1-201ENST00000609974 1624 ntBASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 AC027682.1-201ENST00000562846 899 ntBASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 AC008764.7-201ENST00000593779 1081 ntBASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE7Q9UBL6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 RASA4CP-201ENST00000424092 1398 ntBASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE7Q9UBL6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 DUX4L4-201ENST00000566884 1269 ntBASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CPNE7Q9UBL6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 AC105265.2-201ENST00000467189 838 ntBASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 CA15P2-201ENST00000611168 834 ntBASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 LINC01529-204ENST00000636474 1715 ntBASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE7Q9UBL6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 AC099791.1-201ENST00000416440 715 ntBASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 AL499627.2-201ENST00000606283 725 ntBASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 AC233992.3-201ENST00000607491 485 ntBASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE7Q9UBL6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 BX842568.3-201ENST00000418104 571 ntBASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE7Q9UBL6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 AC133637.1-201ENST00000624115 1537 ntBASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.71■■□□□ 1.07
CPNE7Q9UBL6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE7Q9UBL6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE7Q9UBL6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms