Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
UPF3BQ9BZI7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
UPF3BQ9BZI7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
UPF3BQ9BZI7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 AL353803.4-201ENST00000565882 1934 ntBASIC26.69■■□□□ 1.86
UPF3BQ9BZI7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
UPF3BQ9BZI7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.68■■□□□ 1.86
UPF3BQ9BZI7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.68■■□□□ 1.86
UPF3BQ9BZI7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 AL117328.2-201ENST00000624617 1940 ntBASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UPF3BQ9BZI7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 EP400NL-214ENST00000641289 2402 ntBASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 BX664725.1-201ENST00000438252 379 ntBASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UPF3BQ9BZI7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 AC079834.2-201ENST00000609776 1949 ntBASIC26.65■■□□□ 1.86
UPF3BQ9BZI7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
UPF3BQ9BZI7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UPF3BQ9BZI7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
UPF3BQ9BZI7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
UPF3BQ9BZI7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
UPF3BQ9BZI7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.63■■□□□ 1.85
UPF3BQ9BZI7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.62■■□□□ 1.85
UPF3BQ9BZI7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.61■■□□□ 1.85
UPF3BQ9BZI7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 MIR6722-201ENST00000617286 78 ntBASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF3BQ9BZI7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
UPF3BQ9BZI7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms