Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFT1Q96AA3 KRT18P60-201ENST00000312876 1297 ntBASIC19.73■□□□□ 0.75
RFT1Q96AA3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFT1Q96AA3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFT1Q96AA3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFT1Q96AA3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.73■□□□□ 0.75
RFT1Q96AA3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.72■□□□□ 0.75
RFT1Q96AA3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.72■□□□□ 0.75
RFT1Q96AA3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.72■□□□□ 0.75
RFT1Q96AA3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RFT1Q96AA3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFT1Q96AA3 AL137060.1-201ENST00000618151 2648 ntBASIC19.72■□□□□ 0.75
RFT1Q96AA3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFT1Q96AA3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFT1Q96AA3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFT1Q96AA3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFT1Q96AA3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
RFT1Q96AA3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFT1Q96AA3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFT1Q96AA3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RFT1Q96AA3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 LONRF2P2-201ENST00000439212 571 ntBASIC19.69■□□□□ 0.74
RFT1Q96AA3 DUX4L18-201ENST00000553347 1267 ntBASIC19.69■□□□□ 0.74
RFT1Q96AA3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.69■□□□□ 0.74
RFT1Q96AA3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.69■□□□□ 0.74
RFT1Q96AA3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.69■□□□□ 0.74
RFT1Q96AA3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RFT1Q96AA3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFT1Q96AA3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.69■□□□□ 0.74
RFT1Q96AA3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.68■□□□□ 0.74
RFT1Q96AA3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.68■□□□□ 0.74
RFT1Q96AA3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.68■□□□□ 0.74
RFT1Q96AA3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.68■□□□□ 0.74
RFT1Q96AA3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.68■□□□□ 0.74
RFT1Q96AA3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFT1Q96AA3 SLC25A24-204ENST00000569674 2357 ntBASIC19.68■□□□□ 0.74
RFT1Q96AA3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RFT1Q96AA3 AC242852.2-201ENST00000615738 1807 ntBASIC19.67■□□□□ 0.74
RFT1Q96AA3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.67■□□□□ 0.74
RFT1Q96AA3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.67■□□□□ 0.74
RFT1Q96AA3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFT1Q96AA3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFT1Q96AA3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFT1Q96AA3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RFT1Q96AA3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RFT1Q96AA3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms