Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC9CQ8N5M4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 UNC93B8-201ENST00000511903 705 ntBASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC9CQ8N5M4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 AC144652.1-201ENST00000609974 1624 ntBASIC17.65■□□□□ 0.42
TTC9CQ8N5M4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MIR6724-1-201ENST00000616420 92 ntBASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MIR6724-2-201ENST00000616483 92 ntBASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MIR6724-4-201ENST00000617390 92 ntBASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MIR6724-3-201ENST00000622482 92 ntBASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TTC9CQ8N5M4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 FP325331.1-202ENST00000623531 1380 ntBASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC9CQ8N5M4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 AC068473.5-201ENST00000616428 2072 ntBASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 GUSBP5-201ENST00000418136 578 ntBASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 AL353803.4-201ENST00000565882 1934 ntBASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 AC012676.1-201ENST00000574705 1949 ntBASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC9CQ8N5M4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 KRT16P3-201ENST00000439127 1283 ntBASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC9CQ8N5M4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms