Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.7■□□□□ 0.74
RTTNQ86VV8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
RTTNQ86VV8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.7■□□□□ 0.74
RTTNQ86VV8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.69■□□□□ 0.74
RTTNQ86VV8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.69■□□□□ 0.74
RTTNQ86VV8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
RTTNQ86VV8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTTNQ86VV8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTTNQ86VV8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RTTNQ86VV8 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.68■□□□□ 0.74
RTTNQ86VV8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 SUDS3P1-201ENST00000505831 966 ntBASIC19.68■□□□□ 0.74
RTTNQ86VV8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 MTDHP2-201ENST00000601468 714 ntBASIC19.68■□□□□ 0.74
RTTNQ86VV8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 AC079630.1-202ENST00000618127 1840 ntBASIC19.68■□□□□ 0.74
RTTNQ86VV8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 AC133561.4-201ENST00000566112 224 ntBASIC19.68■□□□□ 0.74
RTTNQ86VV8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.68■□□□□ 0.74
RTTNQ86VV8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTTNQ86VV8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 AC096631.2-201ENST00000436136 790 ntBASIC19.67■□□□□ 0.74
RTTNQ86VV8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
RTTNQ86VV8 MIR6724-1-201ENST00000616420 92 ntBASIC19.67■□□□□ 0.74
RTTNQ86VV8 MIR6724-2-201ENST00000616483 92 ntBASIC19.67■□□□□ 0.74
RTTNQ86VV8 MIR6724-4-201ENST00000617390 92 ntBASIC19.67■□□□□ 0.74
RTTNQ86VV8 MIR6724-3-201ENST00000622482 92 ntBASIC19.67■□□□□ 0.74
RTTNQ86VV8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTTNQ86VV8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.66■□□□□ 0.74
RTTNQ86VV8 MIR4466-201ENST00000606121 54 ntBASIC19.66■□□□□ 0.74
RTTNQ86VV8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTTNQ86VV8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTTNQ86VV8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTTNQ86VV8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.65■□□□□ 0.74
RTTNQ86VV8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTTNQ86VV8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTTNQ86VV8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.65■□□□□ 0.74
RTTNQ86VV8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.65■□□□□ 0.74
RTTNQ86VV8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.65■□□□□ 0.74
RTTNQ86VV8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTTNQ86VV8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.64■□□□□ 0.74
RTTNQ86VV8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTTNQ86VV8 AL356740.2-201ENST00000601559 647 ntBASIC19.64■□□□□ 0.74
RTTNQ86VV8 AL117332.1-201ENST00000622628 974 ntBASIC19.64■□□□□ 0.74
RTTNQ86VV8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTTNQ86VV8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.64■□□□□ 0.73
RTTNQ86VV8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTTNQ86VV8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms