Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.7■■■□□ 2.18
CCDC30Q5VVM6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC30Q5VVM6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC30Q5VVM6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.7■■■□□ 2.18
CCDC30Q5VVM6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 AL355001.2-201ENST00000620617 1191 ntBASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 AC136469.2-201ENST00000623944 1028 ntBASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 AC093323.1-202ENST00000635031 2045 ntBASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.69■■■□□ 2.18
CCDC30Q5VVM6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
CCDC30Q5VVM6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CCDC30Q5VVM6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC30Q5VVM6 SUDS3P1-201ENST00000505831 966 ntBASIC28.68■■■□□ 2.18
CCDC30Q5VVM6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC30Q5VVM6 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.67■■■□□ 2.18
CCDC30Q5VVM6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CCDC30Q5VVM6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.66■■■□□ 2.18
CCDC30Q5VVM6 AL499627.2-201ENST00000606283 725 ntBASIC28.66■■■□□ 2.18
CCDC30Q5VVM6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CCDC30Q5VVM6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC30Q5VVM6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 AC142381.2-201ENST00000566120 298 ntBASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC30Q5VVM6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC30Q5VVM6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.62■■■□□ 2.17
CCDC30Q5VVM6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 AP001330.3-201ENST00000520123 633 ntBASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 AL136967.2-201ENST00000623968 743 ntBASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCDC30Q5VVM6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CCDC30Q5VVM6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 AC133637.1-201ENST00000624115 1537 ntBASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 MIR939-201ENST00000401314 82 ntBASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 AF213884.3-201ENST00000563833 479 ntBASIC28.59■■■□□ 2.17
CCDC30Q5VVM6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms