Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CMC4P56277 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 MIR4466-201ENST00000606121 54 ntBASIC16.68■□□□□ 0.26
CMC4P56277 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CMC4P56277 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CMC4P56277 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 ABCB10P4-201ENST00000566803 2184 ntBASIC16.67■□□□□ 0.26
CMC4P56277 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.67■□□□□ 0.26
CMC4P56277 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMC4P56277 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.67■□□□□ 0.26
CMC4P56277 AC009086.3-201ENST00000623486 1008 ntBASIC16.67■□□□□ 0.26
CMC4P56277 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.66■□□□□ 0.26
CMC4P56277 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMC4P56277 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMC4P56277 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMC4P56277 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMC4P56277 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.66■□□□□ 0.26
CMC4P56277 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.66■□□□□ 0.26
CMC4P56277 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.66■□□□□ 0.26
CMC4P56277 SYT6-210ENST00000641643 1587 ntBASIC16.66■□□□□ 0.26
CMC4P56277 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.65■□□□□ 0.26
CMC4P56277 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMC4P56277 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CMC4P56277 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMC4P56277 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CMC4P56277 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.65■□□□□ 0.26
CMC4P56277 AC099791.2-201ENST00000605725 427 ntBASIC16.65■□□□□ 0.26
CMC4P56277 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.65■□□□□ 0.26
CMC4P56277 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.65■□□□□ 0.26
CMC4P56277 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.65■□□□□ 0.26
CMC4P56277 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMC4P56277 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMC4P56277 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMC4P56277 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMC4P56277 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.64■□□□□ 0.25
CMC4P56277 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.64■□□□□ 0.25
CMC4P56277 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMC4P56277 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMC4P56277 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CMC4P56277 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.64■□□□□ 0.25
CMC4P56277 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.64■□□□□ 0.25
CMC4P56277 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.64■□□□□ 0.25
CMC4P56277 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
CMC4P56277 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMC4P56277 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CMC4P56277 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.63■□□□□ 0.25
CMC4P56277 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
CMC4P56277 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.63■□□□□ 0.25
CMC4P56277 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CMC4P56277 AC093323.1-202ENST00000635031 2045 ntBASIC16.63■□□□□ 0.25
CMC4P56277 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.63■□□□□ 0.25
CMC4P56277 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMC4P56277 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMC4P56277 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.62■□□□□ 0.25
CMC4P56277 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.62■□□□□ 0.25
CMC4P56277 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.62■□□□□ 0.25
CMC4P56277 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CMC4P56277 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.61■□□□□ 0.25
CMC4P56277 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CMC4P56277 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.61■□□□□ 0.25
CMC4P56277 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CMC4P56277 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.61■□□□□ 0.25
CMC4P56277 AC092068.2-201ENST00000590491 1708 ntBASIC16.61■□□□□ 0.25
CMC4P56277 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMC4P56277 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms