Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PMS1P54277 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PMS1P54277 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PMS1P54277 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.72■■□□□ 1.55
PMS1P54277 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PMS1P54277 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.72■■□□□ 1.55
PMS1P54277 BX664725.1-201ENST00000438252 379 ntBASIC24.72■■□□□ 1.55
PMS1P54277 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PMS1P54277 MIR6722-201ENST00000617286 78 ntBASIC24.72■■□□□ 1.55
PMS1P54277 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PMS1P54277 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PMS1P54277 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PMS1P54277 AL117328.2-201ENST00000624617 1940 ntBASIC24.71■■□□□ 1.55
PMS1P54277 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.71■■□□□ 1.55
PMS1P54277 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
PMS1P54277 EP400NL-214ENST00000641289 2402 ntBASIC24.7■■□□□ 1.54
PMS1P54277 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.7■■□□□ 1.54
PMS1P54277 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
PMS1P54277 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.7■■□□□ 1.54
PMS1P54277 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
PMS1P54277 AC079834.2-201ENST00000609776 1949 ntBASIC24.7■■□□□ 1.54
PMS1P54277 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PMS1P54277 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PMS1P54277 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.7■■□□□ 1.54
PMS1P54277 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.7■■□□□ 1.54
PMS1P54277 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.69■■□□□ 1.54
PMS1P54277 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PMS1P54277 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PMS1P54277 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PMS1P54277 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PMS1P54277 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PMS1P54277 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PMS1P54277 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PMS1P54277 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.69■■□□□ 1.54
PMS1P54277 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.69■■□□□ 1.54
PMS1P54277 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PMS1P54277 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PMS1P54277 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.68■■□□□ 1.54
PMS1P54277 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PMS1P54277 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PMS1P54277 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PMS1P54277 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
PMS1P54277 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.68■■□□□ 1.54
PMS1P54277 AC092028.1-203ENST00000608262 953 ntBASIC24.68■■□□□ 1.54
PMS1P54277 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.68■■□□□ 1.54
PMS1P54277 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PMS1P54277 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.67■■□□□ 1.54
PMS1P54277 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PMS1P54277 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.67■■□□□ 1.54
PMS1P54277 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.67■■□□□ 1.54
PMS1P54277 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PMS1P54277 AL451085.2-201ENST00000605085 799 ntBASIC24.67■■□□□ 1.54
PMS1P54277 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.67■■□□□ 1.54
PMS1P54277 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
PMS1P54277 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PMS1P54277 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.67■■□□□ 1.54
PMS1P54277 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.67■■□□□ 1.54
PMS1P54277 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PMS1P54277 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PMS1P54277 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PMS1P54277 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PMS1P54277 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMS1P54277 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PMS1P54277 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMS1P54277 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PMS1P54277 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMS1P54277 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PMS1P54277 AC009299.2-201ENST00000482477 511 ntBASIC24.65■■□□□ 1.54
PMS1P54277 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PMS1P54277 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMS1P54277 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMS1P54277 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PMS1P54277 AC144652.1-201ENST00000609974 1624 ntBASIC24.64■■□□□ 1.54
PMS1P54277 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PMS1P54277 AC005703.6-201ENST00000623265 1329 ntBASIC24.64■■□□□ 1.54
PMS1P54277 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PMS1P54277 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.64■■□□□ 1.54
PMS1P54277 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.64■■□□□ 1.54
PMS1P54277 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMS1P54277 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMS1P54277 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PMS1P54277 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PMS1P54277 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
PMS1P54277 AC239859.2-201ENST00000444165 318 ntBASIC24.63■■□□□ 1.53
PMS1P54277 Z92544.1-202ENST00000571933 1220 ntBASIC24.63■■□□□ 1.53
PMS1P54277 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMS1P54277 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PMS1P54277 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.62■■□□□ 1.53
PMS1P54277 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.62■■□□□ 1.53
PMS1P54277 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.62■■□□□ 1.53
PMS1P54277 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 MIR4787-201ENST00000607364 84 ntBASIC24.62■■□□□ 1.53
PMS1P54277 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PMS1P54277 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PMS1P54277 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms