Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 PHO90YJL198W 2646 nt6.07□□□□□ -1.44
MSH3P25336 VAC17YCL063W 1272 nt6.07□□□□□ -1.44
MSH3P25336 YCR047W-AYCR047W-A 207 nt6.07□□□□□ -1.44
MSH3P25336 RRP8YDR083W 1179 nt6.07□□□□□ -1.44
MSH3P25336 IPK1YDR315C 846 nt6.07□□□□□ -1.44
MSH3P25336 YEL077CYEL077C 3834 nt6.07□□□□□ -1.44
MSH3P25336 VPS71YML041C 843 nt6.07□□□□□ -1.44
MSH3P25336 YBL044WYBL044W 369 nt6.07□□□□□ -1.44
MSH3P25336 SEC17YBL050W 879 nt6.07□□□□□ -1.44
MSH3P25336 NRM1YNR009W 750 nt6.07□□□□□ -1.44
MSH3P25336 ETT1YOR051C 1239 nt6.07□□□□□ -1.44
MSH3P25336 FDC1YDR539W 1512 nt6.07□□□□□ -1.44
MSH3P25336 SHM1YBR263W 1473 nt6.07□□□□□ -1.44
MSH3P25336 RAT1YOR048C 3021 nt6.07□□□□□ -1.44
MSH3P25336 PRT1YOR361C 2292 nt6.06□□□□□ -1.44
MSH3P25336 QRI7YDL104C 1224 nt6.06□□□□□ -1.44
MSH3P25336 HTD2YHR067W 843 nt6.06□□□□□ -1.44
MSH3P25336 RFC2YJR068W 1062 nt6.06□□□□□ -1.44
MSH3P25336 SUB1YMR039C 879 nt6.06□□□□□ -1.44
MSH3P25336 HOR7YMR251W-A 180 nt6.06□□□□□ -1.44
MSH3P25336 SME1YOR159C 285 nt6.06□□□□□ -1.44
MSH3P25336 UTP18YJL069C 1785 nt6.06□□□□□ -1.44
MSH3P25336 CCZ1YBR131W 2115 nt6.05□□□□□ -1.44
MSH3P25336 RBA50YDR527W 1320 nt6.05□□□□□ -1.44
MSH3P25336 ALG9YNL219C 1668 nt6.05□□□□□ -1.44
MSH3P25336 CBS1YDL069C 690 nt6.05□□□□□ -1.44
MSH3P25336 YDR154CYDR154C 351 nt6.05□□□□□ -1.44
MSH3P25336 RPN9YDR427W 1182 nt6.05□□□□□ -1.44
MSH3P25336 IRC22YEL001C 678 nt6.05□□□□□ -1.44
MSH3P25336 YGR111WYGR111W 1203 nt6.05□□□□□ -1.44
MSH3P25336 RSM27YGR215W 333 nt6.05□□□□□ -1.44
MSH3P25336 SNL1YIL016W 480 nt6.05□□□□□ -1.44
MSH3P25336 PAN6YIL145C 930 nt6.05□□□□□ -1.44
MSH3P25336 SNO4YMR322C 714 nt6.05□□□□□ -1.44
MSH3P25336 HSP33YOR391C 714 nt6.05□□□□□ -1.44
MSH3P25336 YBR063CYBR063C 1215 nt6.05□□□□□ -1.44
MSH3P25336 HSP32YPL280W 714 nt6.05□□□□□ -1.44
MSH3P25336 SDA1YGR245C 2304 nt6.05□□□□□ -1.44
MSH3P25336 HOS1YPR068C 1413 nt6.05□□□□□ -1.44
MSH3P25336 IMA1YGR287C 1770 nt6.05□□□□□ -1.44
MSH3P25336 PDH1YPR002W 1551 nt6.05□□□□□ -1.44
MSH3P25336 DUR1,2YBR208C 5508 nt6.05□□□□□ -1.44
MSH3P25336 FOB1YDR110W 1701 nt6.05□□□□□ -1.44
MSH3P25336 UBA2YDR390C 1911 nt6.04□□□□□ -1.44
MSH3P25336 snR56snR56 88 nt6.04□□□□□ -1.44
MSH3P25336 snR83snR83 306 nt6.04□□□□□ -1.44
MSH3P25336 NQM1YGR043C 1002 nt6.04□□□□□ -1.44
MSH3P25336 SOL3YHR163W 750 nt6.04□□□□□ -1.44
MSH3P25336 IST3YIR005W 447 nt6.04□□□□□ -1.44
MSH3P25336 YLR222C-AYLR222C-A 231 nt6.04□□□□□ -1.44
MSH3P25336 YML119WYML119W 1074 nt6.04□□□□□ -1.44
MSH3P25336 PGA3YML125C 939 nt6.04□□□□□ -1.44
MSH3P25336 RRG9YNL213C 645 nt6.04□□□□□ -1.44
MSH3P25336 NOP2YNL061W 1857 nt6.04□□□□□ -1.44
MSH3P25336 GRS1YBR121C 2004 nt6.04□□□□□ -1.44
MSH3P25336 YFL034WYFL034W 3222 nt6.04□□□□□ -1.44
MSH3P25336 YCR015CYCR015C 954 nt6.03□□□□□ -1.44
MSH3P25336 COS7YDL248W 1152 nt6.03□□□□□ -1.44
MSH3P25336 PCT1YGR202C 1275 nt6.03□□□□□ -1.44
MSH3P25336 COS5YJR161C 1152 nt6.03□□□□□ -1.44
MSH3P25336 TVP38YKR088C 1014 nt6.03□□□□□ -1.44
MSH3P25336 SEN34YAR008W 828 nt6.03□□□□□ -1.44
MSH3P25336 GSP1YLR293C 660 nt6.03□□□□□ -1.44
MSH3P25336 MID2YLR332W 1131 nt6.03□□□□□ -1.44
MSH3P25336 YLR339CYLR339C 552 nt6.03□□□□□ -1.44
MSH3P25336 COG5YNL051W 1212 nt6.03□□□□□ -1.44
MSH3P25336 PDR16YNL231C 1056 nt6.03□□□□□ -1.44
MSH3P25336 MGE1YOR232W 687 nt6.03□□□□□ -1.44
MSH3P25336 UMP1YBR173C 447 nt6.03□□□□□ -1.44
MSH3P25336 TRM1YDR120C 1713 nt6.02□□□□□ -1.45
MSH3P25336 SHE10YGL228W 1734 nt6.02□□□□□ -1.45
MSH3P25336 TCM62YBR044C 1719 nt6.02□□□□□ -1.45
MSH3P25336 YDL144CYDL144C 1071 nt6.02□□□□□ -1.45
MSH3P25336 RAD55YDR076W 1221 nt6.02□□□□□ -1.45
MSH3P25336 YGL199CYGL199C 471 nt6.02□□□□□ -1.45
MSH3P25336 AAD10YJR155W 867 nt6.02□□□□□ -1.45
MSH3P25336 MRPS17YMR188C 714 nt6.02□□□□□ -1.45
MSH3P25336 YOR200WYOR200W 399 nt6.02□□□□□ -1.45
MSH3P25336 YBR053CYBR053C 1077 nt6.02□□□□□ -1.45
MSH3P25336 TGS1YPL157W 948 nt6.02□□□□□ -1.45
MSH3P25336 CDC19YAL038W 1503 nt6.02□□□□□ -1.45
MSH3P25336 NSI1YDR026C 1713 nt6.02□□□□□ -1.45
MSH3P25336 IBA57YJR122W 1494 nt6.02□□□□□ -1.45
MSH3P25336 ART10YLR392C 1557 nt6.01□□□□□ -1.45
MSH3P25336 YDR261W-AYDR261W-A 1317 nt6.01□□□□□ -1.45
MSH3P25336 SPS2YDR522C 1509 nt6.01□□□□□ -1.45
MSH3P25336 snR7-LsnR7-L 214 nt6.01□□□□□ -1.45
MSH3P25336 PRE1YER012W 597 nt6.01□□□□□ -1.45
MSH3P25336 SEH1YGL100W 1050 nt6.01□□□□□ -1.45
MSH3P25336 YGL214WYGL214W 486 nt6.01□□□□□ -1.45
MSH3P25336 SDT1YGL224C 843 nt6.01□□□□□ -1.45
MSH3P25336 YGR015CYGR015C 987 nt6.01□□□□□ -1.45
MSH3P25336 PFS1YHR185C 714 nt6.01□□□□□ -1.45
MSH3P25336 FIP1YJR093C 984 nt6.01□□□□□ -1.45
MSH3P25336 BOS1YLR078C 735 nt6.01□□□□□ -1.45
MSH3P25336 LDH1YBR204C 1128 nt6.01□□□□□ -1.45
MSH3P25336 ATE1YGL017W 1512 nt6□□□□□ -1.45
MSH3P25336 CDC43YGL155W 1131 nt6□□□□□ -1.45
MSH3P25336 RPL24BYGR148C 468 nt6□□□□□ -1.45
MSH3P25336 ARP1YHR129C 1155 nt6□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms