Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 MIR3181-201ENST00000578512 73 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 pRNA.6-201ENST00000610482 90 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 pRNA.5-201ENST00000612139 90 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 AC011298.3-201ENST00000615796 283 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 pRNA.11-201ENST00000618423 90 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 pRNA.13-201ENST00000619112 90 ntBASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
SPDYE3A6NKU9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 AC005837.3-201ENST00000612163 286 ntBASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 AC093323.1-202ENST00000635031 2045 ntBASIC25.56■■□□□ 1.68
SPDYE3A6NKU9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 LINC01529-204ENST00000636474 1715 ntBASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 AC019069.1-201ENST00000610008 1333 ntBASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.55■■□□□ 1.68
SPDYE3A6NKU9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 AC079630.1-202ENST00000618127 1840 ntBASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 DUX4L4-201ENST00000566884 1269 ntBASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE3A6NKU9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 MIR4767-201ENST00000582827 78 ntBASIC25.53■■□□□ 1.68
SPDYE3A6NKU9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 EDA-201ENST00000338901 1233 ntBASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE3A6NKU9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPDYE3A6NKU9 AC136469.2-201ENST00000623944 1028 ntBASIC25.51■■□□□ 1.67
SPDYE3A6NKU9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SPDYE3A6NKU9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 AL355001.2-201ENST00000620617 1191 ntBASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE3A6NKU9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE3A6NKU9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 AC142381.2-201ENST00000566120 298 ntBASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 AL031432.3-201ENST00000607698 485 ntBASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms