Protein–RNA interactions for Protein: Q08964

YPL216W, Putative ISWI chromatin-remodeling complex subunit YPL216W, yeastyeast

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL216WQ08964 HUA1YGR268C 597 nt12□□□□□ -0.49
YPL216WQ08964 SPT8YLR055C 1809 nt11.98□□□□□ -0.49
YPL216WQ08964 HEM12YDR047W 1089 nt11.98□□□□□ -0.49
YPL216WQ08964 SPC25YER018C 666 nt11.98□□□□□ -0.49
YPL216WQ08964 ANP1YEL036C 1503 nt11.97□□□□□ -0.49
YPL216WQ08964 STB1YNL309W 1263 nt11.97□□□□□ -0.49
YPL216WQ08964 YHR056W-AYHR056W-A 435 nt11.96□□□□□ -0.49
YPL216WQ08964 YDL086C-AYDL086C-A 435 nt11.95□□□□□ -0.5
YPL216WQ08964 DDR2YOL052C-A 186 nt11.95□□□□□ -0.5
YPL216WQ08964 YPR064WYPR064W 420 nt11.95□□□□□ -0.5
YPL216WQ08964 YDR524C-BYDR524C-B 201 nt11.94□□□□□ -0.5
YPL216WQ08964 TAD3YLR316C 969 nt11.92□□□□□ -0.5
YPL216WQ08964 VPS60YDR486C 690 nt11.89□□□□□ -0.51
YPL216WQ08964 ALG3YBL082C 1377 nt11.89□□□□□ -0.51
YPL216WQ08964 CCT4YDL143W 1587 nt11.88□□□□□ -0.51
YPL216WQ08964 FEN2YCR028C 1539 nt11.87□□□□□ -0.51
YPL216WQ08964 tL(GAG)GtL(GAG)G 82 nt11.87□□□□□ -0.51
YPL216WQ08964 PAC11YDR488C 1602 nt11.86□□□□□ -0.51
YPL216WQ08964 BDH1YAL060W 1149 nt11.86□□□□□ -0.51
YPL216WQ08964 GPI16YHR188C 1833 nt11.86□□□□□ -0.51
YPL216WQ08964 SWE1YJL187C 2460 nt11.85□□□□□ -0.51
YPL216WQ08964 Q0182Q0182 405 nt11.79□□□□□ -0.52
YPL216WQ08964 MIC12YBR262C 321 nt11.78□□□□□ -0.52
YPL216WQ08964 YSP3YOR003W 1437 nt11.77□□□□□ -0.52
YPL216WQ08964 YIR016WYIR016W 798 nt11.77□□□□□ -0.53
YPL216WQ08964 RAX1YOR301W 1308 nt11.77□□□□□ -0.53
YPL216WQ08964 SWC5YBR231C 912 nt11.74□□□□□ -0.53
YPL216WQ08964 UBX6YJL048C 1191 nt11.72□□□□□ -0.53
YPL216WQ08964 CCA1YER168C 1641 nt11.71□□□□□ -0.53
YPL216WQ08964 YDR094WYDR094W 336 nt11.7□□□□□ -0.54
YPL216WQ08964 YFR018CYFR018C 1092 nt11.68□□□□□ -0.54
YPL216WQ08964 YLR415CYLR415C 339 nt11.68□□□□□ -0.54
YPL216WQ08964 PRE6YOL038W 765 nt11.68□□□□□ -0.54
YPL216WQ08964 AGP1YCL025C 1902 nt11.67□□□□□ -0.54
YPL216WQ08964 PEX25YPL112C 1185 nt11.65□□□□□ -0.54
YPL216WQ08964 YFL066CYFL066C 1179 nt11.64□□□□□ -0.55
YPL216WQ08964 BNA2YJR078W 1362 nt11.64□□□□□ -0.55
YPL216WQ08964 YNL115CYNL115C 1935 nt11.62□□□□□ -0.55
YPL216WQ08964 XDJ1YLR090W 1380 nt11.57□□□□□ -0.56
YPL216WQ08964 YGR201CYGR201C 678 nt11.54□□□□□ -0.56
YPL216WQ08964 SHM2YLR058C 1410 nt11.53□□□□□ -0.56
YPL216WQ08964 HHO1YPL127C 777 nt11.53□□□□□ -0.56
YPL216WQ08964 DUT1YBR252W 444 nt11.52□□□□□ -0.57
YPL216WQ08964 PAU16YKL224C 372 nt11.51□□□□□ -0.57
YPL216WQ08964 NIT1YIL164C 600 nt11.49□□□□□ -0.57
YPL216WQ08964 YJL225CYJL225C 5277 nt11.45□□□□□ -0.58
YPL216WQ08964 GDH3YAL062W 1374 nt11.45□□□□□ -0.58
YPL216WQ08964 VPS75YNL246W 795 nt11.45□□□□□ -0.58
YPL216WQ08964 TIM17YJL143W 477 nt11.44□□□□□ -0.58
YPL216WQ08964 FUR4YBR021W 1902 nt11.44□□□□□ -0.58
YPL216WQ08964 YFL015W-AYFL015W-A 318 nt11.42□□□□□ -0.58
YPL216WQ08964 RRT5YFR032C 870 nt11.41□□□□□ -0.58
YPL216WQ08964 SGT2YOR007C 1041 nt11.39□□□□□ -0.59
YPL216WQ08964 AVT6YER119C 1347 nt11.38□□□□□ -0.59
YPL216WQ08964 RDN18-1RDN18-1 1800 nt11.37□□□□□ -0.59
YPL216WQ08964 RDN18-2RDN18-2 1800 nt11.37□□□□□ -0.59
YPL216WQ08964 HSP60YLR259C 1719 nt11.36□□□□□ -0.59
YPL216WQ08964 DAT1YML113W 747 nt11.36□□□□□ -0.59
YPL216WQ08964 MIR1YJR077C 936 nt11.35□□□□□ -0.59
YPL216WQ08964 NVJ2YPR091C 2313 nt11.33□□□□□ -0.6
YPL216WQ08964 STR3YGL184C 1398 nt11.32□□□□□ -0.6
YPL216WQ08964 YCL074WYCL074W 927 nt11.3□□□□□ -0.6
YPL216WQ08964 GOR1YNL274C 1053 nt11.3□□□□□ -0.6
YPL216WQ08964 GLK1YCL040W 1503 nt11.3□□□□□ -0.6
YPL216WQ08964 DUS1YML080W 1272 nt11.29□□□□□ -0.6
YPL216WQ08964 YDR010CYDR010C 333 nt11.26□□□□□ -0.61
YPL216WQ08964 BOR1YNL275W 1731 nt11.23□□□□□ -0.61
YPL216WQ08964 NBP35YGL091C 987 nt11.22□□□□□ -0.61
YPL216WQ08964 SHB17YKR043C 816 nt11.22□□□□□ -0.61
YPL216WQ08964 YCR102CYCR102C 1107 nt11.18□□□□□ -0.62
YPL216WQ08964 THI74YDR438W 1113 nt11.18□□□□□ -0.62
YPL216WQ08964 YKR005CYKR005C 1578 nt11.18□□□□□ -0.62
YPL216WQ08964 AQY2YLL052C 450 nt11.17□□□□□ -0.62
YPL216WQ08964 PRP4YPR178W 1398 nt11.16□□□□□ -0.62
YPL216WQ08964 SHH4YLR164W 507 nt11.15□□□□□ -0.62
YPL216WQ08964 UBA4YHR111W 1323 nt11.14□□□□□ -0.63
YPL216WQ08964 PAU7YAR020C 168 nt11.14□□□□□ -0.63
YPL216WQ08964 MSF1YPR047W 1410 nt11.13□□□□□ -0.63
YPL216WQ08964 NAT4YMR069W 858 nt11.12□□□□□ -0.63
YPL216WQ08964 RET2YFR051C 1641 nt11.11□□□□□ -0.63
YPL216WQ08964 DPS1YLL018C 1674 nt11.11□□□□□ -0.63
YPL216WQ08964 SFA1YDL168W 1161 nt11.1□□□□□ -0.63
YPL216WQ08964 YGR259CYGR259C 441 nt11.08□□□□□ -0.64
YPL216WQ08964 RDN37-1RDN37-1 5354 nt11.08□□□□□ -0.64
YPL216WQ08964 RDN37-2RDN37-2 5354 nt11.08□□□□□ -0.64
YPL216WQ08964 ARP6YLR085C 1317 nt11.06□□□□□ -0.64
YPL216WQ08964 RTN2YDL204W 1182 nt11.05□□□□□ -0.64
YPL216WQ08964 TIR3YIL011W 810 nt11.05□□□□□ -0.64
YPL216WQ08964 SNF1YDR477W 1902 nt11.05□□□□□ -0.64
YPL216WQ08964 PHO89YBR296C 1725 nt11.02□□□□□ -0.65
YPL216WQ08964 YSR3YKR053C 1215 nt11.01□□□□□ -0.65
YPL216WQ08964 PLB1YMR008C 1995 nt10.99□□□□□ -0.65
YPL216WQ08964 YGL034CYGL034C 366 nt10.99□□□□□ -0.65
YPL216WQ08964 YHL019W-AYHL019W-A 594 nt10.99□□□□□ -0.65
YPL216WQ08964 POM34YLR018C 900 nt10.99□□□□□ -0.65
YPL216WQ08964 XYL2YLR070C 1071 nt10.98□□□□□ -0.65
YPL216WQ08964 COQ2YNR041C 1119 nt10.98□□□□□ -0.65
YPL216WQ08964 AAC1YMR056C 930 nt10.96□□□□□ -0.65
YPL216WQ08964 PRO1YDR300C 1287 nt10.95□□□□□ -0.66
YPL216WQ08964 LSC2YGR244C 1284 nt10.95□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 63.1 ms