Protein–RNA interactions for Protein: P04786

TOP1, DNA topoisomerase 1, yeastyeast

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOP1P04786 SCC4YER147C 1875 nt13.1□□□□□ -0.31
TOP1P04786 GLR1YPL091W 1452 nt13.08□□□□□ -0.32
TOP1P04786 AQY1YPR192W 918 nt13.07□□□□□ -0.32
TOP1P04786 YLR415CYLR415C 339 nt13.06□□□□□ -0.32
TOP1P04786 RBG2YGR173W 1107 nt13.04□□□□□ -0.32
TOP1P04786 YSC84YHR016C 1407 nt13.03□□□□□ -0.32
TOP1P04786 VPS75YNL246W 795 nt13.01□□□□□ -0.33
TOP1P04786 YLL053CYLL053C 459 nt12.98□□□□□ -0.33
TOP1P04786 FTR1YER145C 1215 nt12.97□□□□□ -0.33
TOP1P04786 DAT1YML113W 747 nt12.97□□□□□ -0.33
TOP1P04786 SEC11YIR022W 504 nt12.94□□□□□ -0.34
TOP1P04786 GAL1YBR020W 1587 nt12.93□□□□□ -0.34
TOP1P04786 SPC25YER018C 666 nt12.91□□□□□ -0.34
TOP1P04786 PCH2YBR186W 1695 nt12.91□□□□□ -0.34
TOP1P04786 CCT4YDL143W 1587 nt12.9□□□□□ -0.34
TOP1P04786 YGL034CYGL034C 366 nt12.9□□□□□ -0.34
TOP1P04786 STB1YNL309W 1263 nt12.88□□□□□ -0.35
TOP1P04786 BIO4YNR057C 714 nt12.87□□□□□ -0.35
TOP1P04786 GUT2YIL155C 1950 nt12.85□□□□□ -0.35
TOP1P04786 TRM5YHR070W 1500 nt12.83□□□□□ -0.35
TOP1P04786 UBA4YHR111W 1323 nt12.81□□□□□ -0.36
TOP1P04786 GPI16YHR188C 1833 nt12.8□□□□□ -0.36
TOP1P04786 SPT8YLR055C 1809 nt12.79□□□□□ -0.36
TOP1P04786 NDI1YML120C 1542 nt12.78□□□□□ -0.36
TOP1P04786 YDR524C-BYDR524C-B 201 nt12.78□□□□□ -0.36
TOP1P04786 VPS60YDR486C 690 nt12.77□□□□□ -0.37
TOP1P04786 SAM1YLR180W 1149 nt12.75□□□□□ -0.37
TOP1P04786 ALG3YBL082C 1377 nt12.75□□□□□ -0.37
TOP1P04786 SWC5YBR231C 912 nt12.75□□□□□ -0.37
TOP1P04786 YHL050CYHL050C 2094 nt12.73□□□□□ -0.37
TOP1P04786 PAU7YAR020C 168 nt12.71□□□□□ -0.37
TOP1P04786 YMR226CYMR226C 804 nt12.71□□□□□ -0.37
TOP1P04786 SIM1YIL123W 1431 nt12.71□□□□□ -0.38
TOP1P04786 SHB17YKR043C 816 nt12.69□□□□□ -0.38
TOP1P04786 YSR3YKR053C 1215 nt12.69□□□□□ -0.38
TOP1P04786 YNL195CYNL195C 786 nt12.69□□□□□ -0.38
TOP1P04786 ATF2YGR177C 1608 nt12.69□□□□□ -0.38
TOP1P04786 RBG1YAL036C 1110 nt12.68□□□□□ -0.38
TOP1P04786 DDR2YOL052C-A 186 nt12.67□□□□□ -0.38
TOP1P04786 RRT12YCR045C 1476 nt12.66□□□□□ -0.38
TOP1P04786 RAD51YER095W 1203 nt12.66□□□□□ -0.38
TOP1P04786 YFL067WYFL067W 528 nt12.65□□□□□ -0.38
TOP1P04786 XYL2YLR070C 1071 nt12.65□□□□□ -0.38
TOP1P04786 FEN2YCR028C 1539 nt12.63□□□□□ -0.39
TOP1P04786 YDL086C-AYDL086C-A 435 nt12.63□□□□□ -0.39
TOP1P04786 PIB2YGL023C 1908 nt12.62□□□□□ -0.39
TOP1P04786 ANP1YEL036C 1503 nt12.62□□□□□ -0.39
TOP1P04786 YDR010CYDR010C 333 nt12.6□□□□□ -0.39
TOP1P04786 BSP1YPR171W 1731 nt12.59□□□□□ -0.39
TOP1P04786 RTF1YGL244W 1677 nt12.58□□□□□ -0.4
TOP1P04786 ERF2YLR246W 1080 nt12.58□□□□□ -0.4
TOP1P04786 UME6YDR207C 2511 nt12.58□□□□□ -0.4
TOP1P04786 SSN3YPL042C 1668 nt12.57□□□□□ -0.4
TOP1P04786 TIM17YJL143W 477 nt12.56□□□□□ -0.4
TOP1P04786 CRR1YLR213C 1269 nt12.54□□□□□ -0.4
TOP1P04786 YCR087WYCR087W 516 nt12.53□□□□□ -0.4
TOP1P04786 AIM45YPR004C 1035 nt12.53□□□□□ -0.4
TOP1P04786 YIR016WYIR016W 798 nt12.51□□□□□ -0.41
TOP1P04786 BOP3YNL042W 1191 nt12.51□□□□□ -0.41
TOP1P04786 RET2YFR051C 1641 nt12.51□□□□□ -0.41
TOP1P04786 YJL225CYJL225C 5277 nt12.5□□□□□ -0.41
TOP1P04786 SHM2YLR058C 1410 nt12.46□□□□□ -0.41
TOP1P04786 PHO89YBR296C 1725 nt12.45□□□□□ -0.42
TOP1P04786 YNR029CYNR029C 1290 nt12.44□□□□□ -0.42
TOP1P04786 SNG1YGR197C 1644 nt12.44□□□□□ -0.42
TOP1P04786 NIT1YIL164C 600 nt12.41□□□□□ -0.42
TOP1P04786 YLR349WYLR349W 507 nt12.4□□□□□ -0.42
TOP1P04786 SGT2YOR007C 1041 nt12.39□□□□□ -0.43
TOP1P04786 PTK1YKL198C 1989 nt12.38□□□□□ -0.43
TOP1P04786 NCP1YHR042W 2076 nt12.36□□□□□ -0.43
TOP1P04786 STE4YOR212W 1272 nt12.36□□□□□ -0.43
TOP1P04786 HEM12YDR047W 1089 nt12.35□□□□□ -0.43
TOP1P04786 YLR111WYLR111W 333 nt12.35□□□□□ -0.43
TOP1P04786 MIC10YCL057C-A 294 nt12.34□□□□□ -0.43
TOP1P04786 XDJ1YLR090W 1380 nt12.33□□□□□ -0.44
TOP1P04786 COQ2YNR041C 1119 nt12.31□□□□□ -0.44
TOP1P04786 MRP20YDR405W 792 nt12.3□□□□□ -0.44
TOP1P04786 LYS4YDR234W 2082 nt12.27□□□□□ -0.45
TOP1P04786 YLR437C-AYLR437C-A 228 nt12.25□□□□□ -0.45
TOP1P04786 FUN14YAL008W 597 nt12.21□□□□□ -0.45
TOP1P04786 ADH7YCR105W 1086 nt12.2□□□□□ -0.46
TOP1P04786 RAD23YEL037C 1197 nt12.2□□□□□ -0.46
TOP1P04786 GDH3YAL062W 1374 nt12.19□□□□□ -0.46
TOP1P04786 MIC12YBR262C 321 nt12.18□□□□□ -0.46
TOP1P04786 SFA1YDL168W 1161 nt12.17□□□□□ -0.46
TOP1P04786 PAU15YIR041W 375 nt12.16□□□□□ -0.46
TOP1P04786 RPL4BYDR012W 1089 nt12.15□□□□□ -0.46
TOP1P04786 CAB5YDR196C 726 nt12.15□□□□□ -0.46
TOP1P04786 RPL4AYBR031W 1089 nt12.15□□□□□ -0.46
TOP1P04786 YFL054CYFL054C 1941 nt12.15□□□□□ -0.46
TOP1P04786 BOR1YNL275W 1731 nt12.12□□□□□ -0.47
TOP1P04786 RPS14BYJL191W 417 nt12.12□□□□□ -0.47
TOP1P04786 YLR279WYLR279W 390 nt12.11□□□□□ -0.47
TOP1P04786 SDH5YOL071W 489 nt12.09□□□□□ -0.47
TOP1P04786 YGR201CYGR201C 678 nt12.08□□□□□ -0.48
TOP1P04786 YJL195CYJL195C 702 nt12.08□□□□□ -0.48
TOP1P04786 RDN37-1RDN37-1 5354 nt12.07□□□□□ -0.48
TOP1P04786 RDN37-2RDN37-2 5354 nt12.07□□□□□ -0.48
TOP1P04786 BNA2YJR078W 1362 nt12.07□□□□□ -0.48
TOP1P04786 RIB3YDR487C 627 nt12.07□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms