Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.72■■■■□ 3.15
COL17A1Q9UMD9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
COL17A1Q9UMD9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.72■■■■□ 3.15
COL17A1Q9UMD9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.72■■■■□ 3.15
COL17A1Q9UMD9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 GPX1P1-201ENST00000388829 606 ntBASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 AC008687.6-201ENST00000596318 630 ntBASIC34.71■■■■□ 3.15
COL17A1Q9UMD9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 AP004607.4-201ENST00000530158 1459 ntBASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC34.7■■■■□ 3.15
COL17A1Q9UMD9 AC096887.2-201ENST00000623443 1957 ntBASIC34.69■■■■□ 3.14
COL17A1Q9UMD9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL17A1Q9UMD9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL17A1Q9UMD9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC34.69■■■■□ 3.14
COL17A1Q9UMD9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL17A1Q9UMD9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 GUSBP6-202ENST00000438529 1198 ntBASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 AC091060.1-201ENST00000623524 1766 ntBASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.68■■■■□ 3.14
COL17A1Q9UMD9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 AL050303.2-201ENST00000619798 666 ntBASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
COL17A1Q9UMD9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 AC010525.1-201ENST00000585559 441 ntBASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 AC004854.2-201ENST00000608450 1441 ntBASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.66■■■■□ 3.14
COL17A1Q9UMD9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.65■■■■□ 3.14
COL17A1Q9UMD9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 AC097639.1-201ENST00000565519 1891 ntBASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 TPRG1LP1-201ENST00000598702 760 ntBASIC34.64■■■■□ 3.14
COL17A1Q9UMD9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC34.63■■■■□ 3.13
COL17A1Q9UMD9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
COL17A1Q9UMD9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
COL17A1Q9UMD9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC34.63■■■■□ 3.13
COL17A1Q9UMD9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
COL17A1Q9UMD9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
COL17A1Q9UMD9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.61■■■■□ 3.13
COL17A1Q9UMD9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
COL17A1Q9UMD9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.59■■■■□ 3.13
COL17A1Q9UMD9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
COL17A1Q9UMD9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
COL17A1Q9UMD9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL17A1Q9UMD9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
COL17A1Q9UMD9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL17A1Q9UMD9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL17A1Q9UMD9 AC069152.1-201ENST00000438030 544 ntBASIC34.58■■■■□ 3.13
COL17A1Q9UMD9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC34.58■■■■□ 3.13
COL17A1Q9UMD9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC34.57■■■■□ 3.13
COL17A1Q9UMD9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
COL17A1Q9UMD9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
COL17A1Q9UMD9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL17A1Q9UMD9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
COL17A1Q9UMD9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC34.57■■■■□ 3.12
COL17A1Q9UMD9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.56■■■■□ 3.12
COL17A1Q9UMD9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC34.56■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 312.6 ms