Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.32■□□□□ 0.68
TREM2Q9NZC2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 MIR4466-201ENST00000606121 54 ntBASIC19.31■□□□□ 0.68
TREM2Q9NZC2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TREM2Q9NZC2 AC005703.6-201ENST00000623265 1329 ntBASIC19.3■□□□□ 0.68
TREM2Q9NZC2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREM2Q9NZC2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREM2Q9NZC2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.28■□□□□ 0.68
TREM2Q9NZC2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREM2Q9NZC2 DUSP8P5-201ENST00000422884 1815 ntBASIC19.28■□□□□ 0.68
TREM2Q9NZC2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 AL512631.2-201ENST00000604634 923 ntBASIC19.27■□□□□ 0.68
TREM2Q9NZC2 AL139246.5-201ENST00000606645 996 ntBASIC19.27■□□□□ 0.68
TREM2Q9NZC2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREM2Q9NZC2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
TREM2Q9NZC2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.27■□□□□ 0.67
TREM2Q9NZC2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREM2Q9NZC2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms