Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
VCX3BQ9H321 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VCX3BQ9H321 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
VCX3BQ9H321 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VCX3BQ9H321 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VCX3BQ9H321 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VCX3BQ9H321 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.38■■□□□ 1.01
VCX3BQ9H321 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.38■■□□□ 1.01
VCX3BQ9H321 AC092053.2-201ENST00000640557 1818 ntBASIC21.38■■□□□ 1.01
VCX3BQ9H321 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCX3BQ9H321 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
VCX3BQ9H321 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.37■■□□□ 1.01
VCX3BQ9H321 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.37■■□□□ 1.01
VCX3BQ9H321 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
VCX3BQ9H321 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
VCX3BQ9H321 AC008813.1-201ENST00000536597 885 ntBASIC21.37■■□□□ 1.01
VCX3BQ9H321 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 SUZ12P1-203ENST00000578195 985 ntBASIC21.37■■□□□ 1.01
VCX3BQ9H321 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCX3BQ9H321 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.36■■□□□ 1.01
VCX3BQ9H321 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
VCX3BQ9H321 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 AC148477.6-201ENST00000623746 465 ntBASIC21.36■■□□□ 1.01
VCX3BQ9H321 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
VCX3BQ9H321 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCX3BQ9H321 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCX3BQ9H321 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
VCX3BQ9H321 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.35■■□□□ 1.01
VCX3BQ9H321 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCX3BQ9H321 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.35■■□□□ 1.01
VCX3BQ9H321 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VCX3BQ9H321 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.35■■□□□ 1.01
VCX3BQ9H321 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCX3BQ9H321 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.34■■□□□ 1.01
VCX3BQ9H321 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.34■■□□□ 1.01
VCX3BQ9H321 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VCX3BQ9H321 AC073130.3-201ENST00000624389 2278 ntBASIC21.34■■□□□ 1.01
VCX3BQ9H321 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCX3BQ9H321 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VCX3BQ9H321 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
VCX3BQ9H321 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VCX3BQ9H321 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.33■■□□□ 1.01
VCX3BQ9H321 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.33■■□□□ 1.01
VCX3BQ9H321 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
VCX3BQ9H321 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VCX3BQ9H321 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1
VCX3BQ9H321 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VCX3BQ9H321 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.32■■□□□ 1
VCX3BQ9H321 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VCX3BQ9H321 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.32■■□□□ 1
VCX3BQ9H321 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VCX3BQ9H321 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.32■■□□□ 1
VCX3BQ9H321 DUX4L28-201ENST00000623687 678 ntBASIC21.32■■□□□ 1
VCX3BQ9H321 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VCX3BQ9H321 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.32■■□□□ 1
VCX3BQ9H321 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.32■■□□□ 1
VCX3BQ9H321 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VCX3BQ9H321 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
VCX3BQ9H321 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.31■■□□□ 1
VCX3BQ9H321 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms