Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF2Q99496 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF2Q99496 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF2Q99496 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF2Q99496 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF2Q99496 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF2Q99496 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF2Q99496 AC127496.7-201ENST00000625110 1798 ntBASIC17.77■□□□□ 0.44
RNF2Q99496 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF2Q99496 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF2Q99496 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF2Q99496 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF2Q99496 PVT1_1.1-201ENST00000615125 194 ntBASIC17.77■□□□□ 0.44
RNF2Q99496 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF2Q99496 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF2Q99496 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF2Q99496 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF2Q99496 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF2Q99496 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF2Q99496 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF2Q99496 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF2Q99496 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RNF2Q99496 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF2Q99496 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF2Q99496 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF2Q99496 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF2Q99496 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF2Q99496 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF2Q99496 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF2Q99496 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF2Q99496 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
RNF2Q99496 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF2Q99496 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF2Q99496 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF2Q99496 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF2Q99496 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF2Q99496 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF2Q99496 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF2Q99496 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF2Q99496 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF2Q99496 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RNF2Q99496 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF2Q99496 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF2Q99496 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF2Q99496 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF2Q99496 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF2Q99496 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RNF2Q99496 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 AC022616.5-201ENST00000518796 181 ntBASIC17.73■□□□□ 0.43
RNF2Q99496 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF2Q99496 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF2Q99496 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF2Q99496 AC090877.2-201ENST00000558441 1738 ntBASIC17.72■□□□□ 0.43
RNF2Q99496 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF2Q99496 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF2Q99496 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF2Q99496 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF2Q99496 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF2Q99496 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms