Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFT1Q96AA3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.8■□□□□ 0.76
RFT1Q96AA3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFT1Q96AA3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.8■□□□□ 0.76
RFT1Q96AA3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.8■□□□□ 0.76
RFT1Q96AA3 AC087393.1-201ENST00000582896 145 ntBASIC19.8■□□□□ 0.76
RFT1Q96AA3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFT1Q96AA3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
RFT1Q96AA3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 AC092068.2-201ENST00000590491 1708 ntBASIC19.79■□□□□ 0.76
RFT1Q96AA3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 AC090877.2-201ENST00000558441 1738 ntBASIC19.79■□□□□ 0.76
RFT1Q96AA3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFT1Q96AA3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFT1Q96AA3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFT1Q96AA3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
RFT1Q96AA3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFT1Q96AA3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RFT1Q96AA3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.77■□□□□ 0.76
RFT1Q96AA3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFT1Q96AA3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFT1Q96AA3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RFT1Q96AA3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFT1Q96AA3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFT1Q96AA3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFT1Q96AA3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFT1Q96AA3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFT1Q96AA3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFT1Q96AA3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RFT1Q96AA3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.76■□□□□ 0.75
RFT1Q96AA3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 AL592295.1-201ENST00000400984 884 ntBASIC19.76■□□□□ 0.75
RFT1Q96AA3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
RFT1Q96AA3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFT1Q96AA3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFT1Q96AA3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFT1Q96AA3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 AC129492.7-201ENST00000622992 756 ntBASIC19.75■□□□□ 0.75
RFT1Q96AA3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.75■□□□□ 0.75
RFT1Q96AA3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFT1Q96AA3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFT1Q96AA3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFT1Q96AA3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms