Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 pRNA.13-201ENST00000619112 90 ntBASIC21.66■■□□□ 1.06
RCBTB1Q8NDN9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCBTB1Q8NDN9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCBTB1Q8NDN9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCBTB1Q8NDN9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCBTB1Q8NDN9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 IRS3P-201ENST00000223076 1006 ntBASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 AC233992.3-201ENST00000607491 485 ntBASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RCBTB1Q8NDN9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 MIR6821-201ENST00000617625 74 ntBASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCBTB1Q8NDN9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 AC097381.1-201ENST00000429019 1296 ntBASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 AC104564.3-201ENST00000582367 638 ntBASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 AC087623.3-201ENST00000607047 1098 ntBASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.63■■□□□ 1.05
RCBTB1Q8NDN9 AL139125.2-201ENST00000623134 1869 ntBASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 BX842568.3-201ENST00000418104 571 ntBASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCBTB1Q8NDN9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCBTB1Q8NDN9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.6■■□□□ 1.05
RCBTB1Q8NDN9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCBTB1Q8NDN9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RCBTB1Q8NDN9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.58■■□□□ 1.05
RCBTB1Q8NDN9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RCBTB1Q8NDN9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.58■■□□□ 1.05
RCBTB1Q8NDN9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RCBTB1Q8NDN9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RCBTB1Q8NDN9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.58■■□□□ 1.04
RCBTB1Q8NDN9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 AC126544.1-201ENST00000580842 1059 ntBASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCBTB1Q8NDN9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCBTB1Q8NDN9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms