Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC01555Q8NAE3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01555Q8NAE3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 AC079630.1-202ENST00000618127 1840 ntBASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
LINC01555Q8NAE3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.72■■□□□ 1.07
LINC01555Q8NAE3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LINC01555Q8NAE3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC01555Q8NAE3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LINC01555Q8NAE3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 AC099791.2-201ENST00000605725 427 ntBASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 ANOS2P-203ENST00000472227 1816 ntBASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01555Q8NAE3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 AC144652.1-201ENST00000609974 1624 ntBASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01555Q8NAE3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC01555Q8NAE3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC01555Q8NAE3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.68■■□□□ 1.06
LINC01555Q8NAE3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC01555Q8NAE3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LINC01555Q8NAE3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 AC006455.2-201ENST00000429931 906 ntBASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 AC241377.3-202ENST00000626088 1088 ntBASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 AC241585.3-202ENST00000628937 1088 ntBASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 AC245100.8-202ENST00000629247 1058 ntBASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01555Q8NAE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.66■■□□□ 1.06
LINC01555Q8NAE3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 FP325331.1-202ENST00000623531 1380 ntBASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 AC092068.2-201ENST00000590491 1708 ntBASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LINC01555Q8NAE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms