Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 SYT6-210ENST00000641643 1587 ntBASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 AC024257.2-201ENST00000549699 147 ntBASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 MIR3181-201ENST00000578512 73 ntBASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 AL031432.3-201ENST00000607698 485 ntBASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 AC009086.3-201ENST00000623486 1008 ntBASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
LIMS2Q7Z4I7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 AC011298.3-201ENST00000615796 283 ntBASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LIMS2Q7Z4I7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 AC135279.3-201ENST00000610945 1311 ntBASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 PBX2P1-201ENST00000493219 1291 ntBASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.92■■□□□ 1.42
LIMS2Q7Z4I7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 AL499627.2-201ENST00000606283 725 ntBASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
LIMS2Q7Z4I7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 AC079630.1-202ENST00000618127 1840 ntBASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.9■■□□□ 1.42
LIMS2Q7Z4I7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LIMS2Q7Z4I7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LIMS2Q7Z4I7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LIMS2Q7Z4I7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.89■■□□□ 1.42
LIMS2Q7Z4I7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 AC005837.3-201ENST00000612163 286 ntBASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 LINC01529-204ENST00000636474 1715 ntBASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LIMS2Q7Z4I7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 AC136469.2-201ENST00000623944 1028 ntBASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.88■■□□□ 1.41
LIMS2Q7Z4I7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 SUDS3P1-201ENST00000505831 966 ntBASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LIMS2Q7Z4I7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms