Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 RCK2YLR248W 1833 nt5.67□□□□□ -1.5
TY1A-PR3Q6Q5H1 YPR196WYPR196W 1413 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YPT1YFL038C 621 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 SOH1YGL127C 384 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 TDA10YGR205W 873 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YHL046W-AYHL046W-A 327 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 LEU5YHR002W 1074 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YHR127WYHR127W 732 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 GVP36YIL041W 981 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 EFM4YIL064W 774 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YKL162CYKL162C 1209 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YKL177WYKL177W 339 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YLR462WYLR462W 609 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 CPR3YML078W 549 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 CPT1YNL130C 1182 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 RPC34YNR003C 954 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YPR012WYPR012W 255 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 YPR202WYPR202W 717 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 MTH1YDR277C 1302 nt5.66□□□□□ -1.5
TY1A-PR3Q6Q5H1 HXT4YHR092C 1731 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 SNU23YDL098C 585 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 NSE4YDL105W 1209 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 DAS2YDR020C 699 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 PET117YER058W 324 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 YGL082WYGL082W 1146 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 SRB5YGR104C 924 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 RRF1YHR038W 693 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 BET4YJL031C 984 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 MHT1YLL062C 975 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 RLP24YLR009W 600 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 MAP1YLR244C 1164 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 YLR347W-AYLR347W-A 141 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 SAM37YMR060C 984 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 YMR206WYMR206W 942 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 MRPS12YNR036C 462 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 MIX23YBL107C 591 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 YPR172WYPR172W 603 nt5.65□□□□□ -1.5
TY1A-PR3Q6Q5H1 LSG1YGL099W 1923 nt5.65□□□□□ -1.51
TY1A-PR3Q6Q5H1 GDH1YOR375C 1365 nt5.65□□□□□ -1.51
TY1A-PR3Q6Q5H1 MAL12YGR292W 1755 nt5.65□□□□□ -1.51
TY1A-PR3Q6Q5H1 MAL32YBR299W 1755 nt5.65□□□□□ -1.51
TY1A-PR3Q6Q5H1 PET494YNR045W 1470 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 YFL042CYFL042C 2025 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 FCF1YDR339C 570 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 BUD19YJL188C 309 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 FBA1YKL060C 1080 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 YLR264C-AYLR264C-A 117 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 ECM13YBL043W 774 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 ARG1YOL058W 1263 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 MRP51YPL118W 1035 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 CIN2YPL241C 807 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 YPR170W-AYPR170W-A 186 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 PDB1YBR221C 1101 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 VPS38YLR360W 1320 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 BZZ1YHR114W 1902 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 MET3YJR010W 1536 nt5.64□□□□□ -1.51
TY1A-PR3Q6Q5H1 RPL13AYDL082W 600 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 RSM10YDR041W 612 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 TGA1tA(UGC)A 73 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 tA(UGC)EtA(UGC)E 73 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 tA(UGC)GtA(UGC)G 73 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 tA(UGC)LtA(UGC)L 73 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 tA(UGC)OtA(UGC)O 73 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 LSM4YER112W 564 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 RPL24AYGL031C 468 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 PRP18YGR006W 756 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 SVP26YHR181W 687 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 SYS1YJL004C 612 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 TPP1YMR156C 717 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 SPS18YNL204C 903 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 ELA1YNL230C 1140 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 CTF19YPL018W 1110 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 LAT1YNL071W 1449 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 PMT5YDL093W 2232 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 ALT2YDR111C 1524 nt5.63□□□□□ -1.51
TY1A-PR3Q6Q5H1 COS12YGL263W 1143 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 YGR064WYGR064W 369 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 NCA3YJL116C 1014 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 IRC9YJL142C 393 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 STE18YJR086W 333 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 SFC1YJR095W 969 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 RPL10YLR075W 666 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 YLR334CYLR334C 381 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 MRPL17YNL252C 846 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 ATP19YOL077W-A 207 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 TUM1YOR251C 915 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 YPL261CYPL261C 309 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 SHE3YBR130C 1278 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 QNS1YHR074W 2145 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 SKN1YGR143W 2316 nt5.62□□□□□ -1.51
TY1A-PR3Q6Q5H1 YDL027CYDL027C 1263 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 RUB1YDR139C 234 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)BtG(GCC)B 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 SUF16tG(GCC)C 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)D1tG(GCC)D1 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)D2tG(GCC)D2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)EtG(GCC)E 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 SUF20tG(GCC)F1 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)F2tG(GCC)F2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)G1tG(GCC)G1 71 nt5.61□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms