Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 pRNA.11-201ENST00000618423 90 ntBASIC19.89■□□□□ 0.77
TNFSF13O75888 pRNA.13-201ENST00000619112 90 ntBASIC19.89■□□□□ 0.77
TNFSF13O75888 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF13O75888 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF13O75888 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF13O75888 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF13O75888 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 LINC00543-201ENST00000567234 1845 ntBASIC19.88■□□□□ 0.77
TNFSF13O75888 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 CA15P2-201ENST00000611168 834 ntBASIC19.88■□□□□ 0.77
TNFSF13O75888 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF13O75888 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TNFSF13O75888 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF13O75888 LINC01124-201ENST00000409786 2117 ntBASIC19.87■□□□□ 0.77
TNFSF13O75888 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF13O75888 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFSF13O75888 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF13O75888 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF13O75888 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFSF13O75888 AC008764.7-201ENST00000593779 1081 ntBASIC19.87■□□□□ 0.77
TNFSF13O75888 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF13O75888 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF13O75888 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF13O75888 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TNFSF13O75888 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF13O75888 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF13O75888 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF13O75888 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF13O75888 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF13O75888 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TNFSF13O75888 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF13O75888 AL139125.2-201ENST00000623134 1869 ntBASIC19.86■□□□□ 0.77
TNFSF13O75888 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF13O75888 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TNFSF13O75888 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 AC099791.1-201ENST00000416440 715 ntBASIC19.85■□□□□ 0.77
TNFSF13O75888 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF13O75888 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.85■□□□□ 0.77
TNFSF13O75888 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TNFSF13O75888 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF13O75888 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF13O75888 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TNFSF13O75888 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF13O75888 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 BX842568.3-201ENST00000418104 571 ntBASIC19.84■□□□□ 0.77
TNFSF13O75888 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFSF13O75888 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF13O75888 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF13O75888 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF13O75888 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF13O75888 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF13O75888 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TNFSF13O75888 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF13O75888 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF13O75888 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF13O75888 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF13O75888 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF13O75888 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF13O75888 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TNFSF13O75888 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFSF13O75888 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.83■□□□□ 0.77
TNFSF13O75888 AC233992.3-201ENST00000607491 485 ntBASIC19.83■□□□□ 0.77
TNFSF13O75888 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF13O75888 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TNFSF13O75888 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TNFSF13O75888 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF13O75888 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF13O75888 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TNFSF13O75888 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF13O75888 RARRES2P6-201ENST00000567333 442 ntBASIC19.82■□□□□ 0.76
TNFSF13O75888 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF13O75888 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFSF13O75888 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms