Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGA3Q9Y5H0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA3Q9Y5H0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 MIR939-201ENST00000401314 82 ntBASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA3Q9Y5H0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 SYT6-210ENST00000641643 1587 ntBASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 AF213884.3-201ENST00000563833 479 ntBASIC21.83■■□□□ 1.09
PCDHGA3Q9Y5H0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA3Q9Y5H0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGA3Q9Y5H0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA3Q9Y5H0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA3Q9Y5H0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA3Q9Y5H0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 AC105265.2-201ENST00000467189 838 ntBASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 AC091305.1-201ENST00000479476 895 ntBASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 AP001330.3-201ENST00000520123 633 ntBASIC21.81■■□□□ 1.08
PCDHGA3Q9Y5H0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 MIR6089-201ENST00000616698 64 ntBASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 AC022211.4-201ENST00000625094 2161 ntBASIC21.8■■□□□ 1.08
PCDHGA3Q9Y5H0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA3Q9Y5H0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 AL138724.1-201ENST00000606771 1088 ntBASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 MIR5787-201ENST00000611784 55 ntBASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA3Q9Y5H0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA3Q9Y5H0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 SERBP1P1-201ENST00000396021 1160 ntBASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 MIR4767-201ENST00000582827 78 ntBASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 AC011298.3-201ENST00000615796 283 ntBASIC21.76■■□□□ 1.07
PCDHGA3Q9Y5H0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms