Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 AC131281.2-201ENST00000520478 145 ntBASIC19.41■□□□□ 0.7
TREM2Q9NZC2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 MIR3621-201ENST00000580529 85 ntBASIC19.4■□□□□ 0.7
TREM2Q9NZC2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREM2Q9NZC2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TREM2Q9NZC2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREM2Q9NZC2 AL136116.3-201ENST00000402907 1138 ntBASIC19.38■□□□□ 0.69
TREM2Q9NZC2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 AL161729.1-201ENST00000604104 1402 ntBASIC19.38■□□□□ 0.69
TREM2Q9NZC2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREM2Q9NZC2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 MIR6722-201ENST00000617286 78 ntBASIC19.37■□□□□ 0.69
TREM2Q9NZC2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TREM2Q9NZC2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREM2Q9NZC2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREM2Q9NZC2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREM2Q9NZC2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREM2Q9NZC2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TREM2Q9NZC2 ABCB10P4-201ENST00000566803 2184 ntBASIC19.33■□□□□ 0.69
TREM2Q9NZC2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREM2Q9NZC2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TREM2Q9NZC2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.33■□□□□ 0.68
TREM2Q9NZC2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms