Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 YBX1P1-201ENST00000445822 960 ntBASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEFF1Q8IYR6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEFF1Q8IYR6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 AL137784.2-201ENST00000607332 1000 ntBASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TMEFF1Q8IYR6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 SLC47A1P1-202ENST00000449666 945 ntBASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.53■■□□□ 1.2
TMEFF1Q8IYR6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L2-201ENST00000561772 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L6-201ENST00000626483 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L1-201ENST00000627662 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L8-201ENST00000629013 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L3-201ENST00000630187 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L7-201ENST00000630678 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 DUX4L5-201ENST00000630834 1275 ntBASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.52■■□□□ 1.2
TMEFF1Q8IYR6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TMEFF1Q8IYR6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.51■■□□□ 1.19
TMEFF1Q8IYR6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEFF1Q8IYR6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms