Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC141586.4-201ENST00000624558 1573 ntBASIC19.97■□□□□ 0.79
HOXC12P31275 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC12P31275 MIR5787-201ENST00000611784 55 ntBASIC19.97■□□□□ 0.79
HOXC12P31275 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC12P31275 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC12P31275 SUDS3P1-201ENST00000505831 966 ntBASIC19.96■□□□□ 0.79
HOXC12P31275 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC12P31275 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HOXC12P31275 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HOXC12P31275 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HOXC12P31275 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC12P31275 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC12P31275 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC12P31275 LINC01124-201ENST00000409786 2117 ntBASIC19.96■□□□□ 0.79
HOXC12P31275 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
HOXC12P31275 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC12P31275 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC12P31275 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HOXC12P31275 ALDH1A3-203ENST00000557963 1670 ntBASIC19.95■□□□□ 0.78
HOXC12P31275 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC12P31275 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HOXC12P31275 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC12P31275 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC12P31275 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
HOXC12P31275 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HOXC12P31275 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HOXC12P31275 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.94■□□□□ 0.78
HOXC12P31275 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC12P31275 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 AL031432.3-201ENST00000607698 485 ntBASIC19.94■□□□□ 0.78
HOXC12P31275 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HOXC12P31275 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC12P31275 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
HOXC12P31275 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC12P31275 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXC12P31275 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXC12P31275 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HOXC12P31275 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC12P31275 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC12P31275 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC12P31275 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC12P31275 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HOXC12P31275 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC12P31275 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC12P31275 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC12P31275 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HOXC12P31275 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC12P31275 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC12P31275 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC12P31275 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 UNC93B3-201ENST00000308076 687 ntBASIC19.91■□□□□ 0.78
HOXC12P31275 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.91■□□□□ 0.78
HOXC12P31275 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC12P31275 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC12P31275 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC12P31275 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC12P31275 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC12P31275 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.9■□□□□ 0.78
HOXC12P31275 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC12P31275 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HOXC12P31275 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC12P31275 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC12P31275 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HOXC12P31275 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC12P31275 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC12P31275 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC12P31275 LINC00543-201ENST00000567234 1845 ntBASIC19.9■□□□□ 0.78
HOXC12P31275 AL139125.2-201ENST00000623134 1869 ntBASIC19.9■□□□□ 0.78
HOXC12P31275 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC12P31275 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC12P31275 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC12P31275 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC12P31275 AL136162.1-201ENST00000607711 1078 ntBASIC19.89■□□□□ 0.77
HOXC12P31275 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC12P31275 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC12P31275 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC12P31275 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms