Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABRR1P24046 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABRR1P24046 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.35■□□□□ 0.69
GABRR1P24046 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GABRR1P24046 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.35■□□□□ 0.69
GABRR1P24046 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.35■□□□□ 0.69
GABRR1P24046 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABRR1P24046 AC079834.2-201ENST00000609776 1949 ntBASIC19.35■□□□□ 0.69
GABRR1P24046 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABRR1P24046 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GABRR1P24046 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
GABRR1P24046 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABRR1P24046 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GABRR1P24046 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.34■□□□□ 0.69
GABRR1P24046 THA1P-201ENST00000590384 1145 ntBASIC19.34■□□□□ 0.69
GABRR1P24046 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABRR1P24046 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GABRR1P24046 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GABRR1P24046 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GABRR1P24046 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.33■□□□□ 0.68
GABRR1P24046 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.33■□□□□ 0.68
GABRR1P24046 AC120024.1-201ENST00000562672 995 ntBASIC19.33■□□□□ 0.68
GABRR1P24046 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.33■□□□□ 0.68
GABRR1P24046 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GABRR1P24046 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GABRR1P24046 KRT8P33-201ENST00000508125 1423 ntBASIC19.33■□□□□ 0.68
GABRR1P24046 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.33■□□□□ 0.68
GABRR1P24046 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.32■□□□□ 0.68
GABRR1P24046 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GABRR1P24046 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GABRR1P24046 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
GABRR1P24046 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRR1P24046 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
GABRR1P24046 AC092068.2-201ENST00000590491 1708 ntBASIC19.31■□□□□ 0.68
GABRR1P24046 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GABRR1P24046 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.31■□□□□ 0.68
GABRR1P24046 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
GABRR1P24046 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 YBX1P4-201ENST00000392794 808 ntBASIC19.3■□□□□ 0.68
GABRR1P24046 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRR1P24046 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRR1P24046 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GABRR1P24046 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRR1P24046 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRR1P24046 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRR1P24046 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GABRR1P24046 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRR1P24046 DUSP8P3-201ENST00000399571 1760 ntBASIC19.29■□□□□ 0.68
GABRR1P24046 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 KRT18P24-201ENST00000344739 1156 ntBASIC19.28■□□□□ 0.68
GABRR1P24046 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GABRR1P24046 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.28■□□□□ 0.68
GABRR1P24046 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRR1P24046 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRR1P24046 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRR1P24046 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRR1P24046 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRR1P24046 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 AC233723.2-201ENST00000623798 2106 ntBASIC19.28■□□□□ 0.68
GABRR1P24046 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRR1P24046 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GABRR1P24046 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRR1P24046 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
GABRR1P24046 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
GABRR1P24046 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.27■□□□□ 0.68
GABRR1P24046 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRR1P24046 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRR1P24046 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRR1P24046 MIR4508-201ENST00000584178 70 ntBASIC19.27■□□□□ 0.68
GABRR1P24046 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRR1P24046 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRR1P24046 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRR1P24046 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRR1P24046 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms