Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TNFSF13O75888 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TNFSF13O75888 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.97■□□□□ 0.79
TNFSF13O75888 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.97■□□□□ 0.79
TNFSF13O75888 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF13O75888 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF13O75888 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF13O75888 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFSF13O75888 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFSF13O75888 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF13O75888 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF13O75888 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TNFSF13O75888 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF13O75888 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF13O75888 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF13O75888 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF13O75888 MIR3181-201ENST00000578512 73 ntBASIC19.95■□□□□ 0.78
TNFSF13O75888 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF13O75888 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF13O75888 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TNFSF13O75888 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF13O75888 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF13O75888 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF13O75888 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TNFSF13O75888 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF13O75888 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF13O75888 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF13O75888 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFSF13O75888 AC136469.2-201ENST00000623944 1028 ntBASIC19.94■□□□□ 0.78
TNFSF13O75888 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF13O75888 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF13O75888 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF13O75888 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF13O75888 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TNFSF13O75888 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TNFSF13O75888 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF13O75888 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF13O75888 AC091305.1-201ENST00000479476 895 ntBASIC19.93■□□□□ 0.78
TNFSF13O75888 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.93■□□□□ 0.78
TNFSF13O75888 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TNFSF13O75888 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF13O75888 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF13O75888 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF13O75888 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF13O75888 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
TNFSF13O75888 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.93■□□□□ 0.78
TNFSF13O75888 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF13O75888 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TNFSF13O75888 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF13O75888 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF13O75888 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF13O75888 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF13O75888 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF13O75888 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF13O75888 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF13O75888 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF13O75888 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TNFSF13O75888 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF13O75888 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF13O75888 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF13O75888 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF13O75888 AC141586.4-201ENST00000624558 1573 ntBASIC19.91■□□□□ 0.78
TNFSF13O75888 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF13O75888 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF13O75888 AC105265.2-201ENST00000467189 838 ntBASIC19.91■□□□□ 0.78
TNFSF13O75888 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.91■□□□□ 0.78
TNFSF13O75888 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TNFSF13O75888 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF13O75888 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFSF13O75888 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF13O75888 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF13O75888 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.91■□□□□ 0.78
TNFSF13O75888 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF13O75888 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TNFSF13O75888 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF13O75888 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 RASA4CP-201ENST00000424092 1398 ntBASIC19.9■□□□□ 0.78
TNFSF13O75888 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF13O75888 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF13O75888 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF13O75888 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.89■□□□□ 0.77
TNFSF13O75888 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF13O75888 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.89■□□□□ 0.77
TNFSF13O75888 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFSF13O75888 AC027682.1-201ENST00000562846 899 ntBASIC19.89■□□□□ 0.77
TNFSF13O75888 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFSF13O75888 pRNA.6-201ENST00000610482 90 ntBASIC19.89■□□□□ 0.77
TNFSF13O75888 pRNA.5-201ENST00000612139 90 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms