Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.332e-8■□□□□ 9.3
EIF3DO15371 G3BP1-203ENST00000507878 577 ntTSL 412.51□□□□□ -0.412e-8■□□□□ 9.3
EIF3DO15371 G3BP1-204ENST00000517947 558 ntTSL 412.51□□□□□ -0.412e-8■□□□□ 9.3
EIF3DO15371 G3BP1-210ENST00000522367 580 ntTSL 312.51□□□□□ -0.412e-8■□□□□ 9.3
EIF3DO15371 PIEZO1-211ENST00000495568 901 ntTSL 212.33□□□□□ -0.441e-8■□□□□ 9.3
EIF3DO15371 G3BP1-206ENST00000519832 1173 ntTSL 1 (best)11.42□□□□□ -0.582e-8■□□□□ 9.3
EIF3DO15371 G3BP1-205ENST00000518726 869 ntTSL 1 (best)10.78□□□□□ -0.682e-8■□□□□ 9.3
EIF3DO15371 PIEZO1-204ENST00000466823 584 ntTSL 28.9□□□□□ -0.981e-8■□□□□ 9.3
EIF3DO15371 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.452e-8■□□□□ 9.3
EIF3DO15371 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.14□□□□□ -2.071e-8■□□□□ 9.3
EIF3DO15371 ASPSCR1-210ENST00000581608 2387 ntTSL 222.43■■□□□ 1.182e-9■□□□□ 9.3
EIF3DO15371 ASPSCR1-205ENST00000578236 3277 ntTSL 214.25□□□□□ -0.132e-9■□□□□ 9.3
EIF3DO15371 LAMA5-204ENST00000462415 585 ntTSL 218.68■□□□□ 0.582e-13■□□□□ 9.3
EIF3DO15371 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.442e-6■□□□□ 9.3
EIF3DO15371 HIST1H3J-202ENST00000479986 522 ntTSL 223.85■■□□□ 1.417e-28■□□□□ 9.3
EIF3DO15371 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.03■□□□□ 0.967e-28■□□□□ 9.3
EIF3DO15371 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.822e-6■□□□□ 9.3
EIF3DO15371 HNRNPM-214ENST00000600806 2373 ntTSL 520.03■□□□□ 0.82e-6■□□□□ 9.3
EIF3DO15371 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.662e-6■□□□□ 9.3
EIF3DO15371 FGFR1-223ENST00000496296 1898 ntTSL 1 (best)23.19■■□□□ 1.34e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-211ENST00000529643 660 ntTSL 322.33■■□□□ 1.174e-8■□□□□ 9.3
EIF3DO15371 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.26■□□□□ 0.994e-8■□□□□ 9.3
EIF3DO15371 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.954e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.69■□□□□ 0.94e-8■□□□□ 9.3
EIF3DO15371 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.874e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.854e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-206ENST00000526242 474 ntTSL 419.77■□□□□ 0.764e-8■□□□□ 9.3
EIF3DO15371 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.46■□□□□ 0.714e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-207ENST00000526397 882 ntTSL 518.86■□□□□ 0.614e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.594e-8■□□□□ 9.3
EIF3DO15371 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.544e-8■□□□□ 9.3
EIF3DO15371 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.524e-8■□□□□ 9.3
EIF3DO15371 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.68■□□□□ 0.14e-8■□□□□ 9.3
EIF3DO15371 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.55■□□□□ 0.084e-8■□□□□ 9.3
EIF3DO15371 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.35■□□□□ 0.054e-8■□□□□ 9.3
EIF3DO15371 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.14■□□□□ 0.014e-8■□□□□ 9.3
EIF3DO15371 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC13.67□□□□□ -0.227e-8■□□□□ 9.3
EIF3DO15371 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.87□□□□□ -0.354e-8■□□□□ 9.3
EIF3DO15371 SERPINH1-203ENST00000525492 529 ntTSL 411.35□□□□□ -0.594e-8■□□□□ 9.3
EIF3DO15371 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC11.03□□□□□ -0.644e-8■□□□□ 9.3
EIF3DO15371 C14orf2-212ENST00000557260 856 ntTSL 1 (best)11.03□□□□□ -0.644e-8■□□□□ 9.3
EIF3DO15371 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.687e-8■□□□□ 9.3
EIF3DO15371 MCM3-203ENST00000421471 1030 ntTSL 510.73□□□□□ -0.697e-8■□□□□ 9.3
EIF3DO15371 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.94□□□□□ -0.827e-8■□□□□ 9.3
EIF3DO15371 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC9.67□□□□□ -0.867e-8■□□□□ 9.3
EIF3DO15371 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.864e-8■□□□□ 9.3
EIF3DO15371 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC9.23□□□□□ -0.934e-8■□□□□ 9.3
EIF3DO15371 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.73□□□□□ -1.014e-8■□□□□ 9.3
EIF3DO15371 C14orf2-207ENST00000554528 526 ntTSL 28.4□□□□□ -1.064e-8■□□□□ 9.3
EIF3DO15371 C14orf2-204ENST00000553449 271 ntTSL 28.36□□□□□ -1.074e-8■□□□□ 9.3
EIF3DO15371 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.134e-8■□□□□ 9.3
EIF3DO15371 C14orf2-205ENST00000554089 932 ntTSL 1 (best)7.97□□□□□ -1.134e-8■□□□□ 9.3
EIF3DO15371 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.464e-8■□□□□ 9.3
EIF3DO15371 HOOK3-204ENST00000527306 2325 ntTSL 1 (best)23.81■■□□□ 1.41e-6■□□□□ 9.3
EIF3DO15371 MACF1-230ENST00000530275 5767 nt13.53□□□□□ -0.241e-6■□□□□ 9.3
EIF3DO15371 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC11.36□□□□□ -0.591e-6■□□□□ 9.3
EIF3DO15371 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.971e-6■□□□□ 9.3
EIF3DO15371 AC013394.1-202ENST00000630790 4499 ntTSL 28.91□□□□□ -0.981e-6■□□□□ 9.3
EIF3DO15371 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.45□□□□□ -1.381e-6■□□□□ 9.3
EIF3DO15371 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.41□□□□□ -1.381e-6■□□□□ 9.3
EIF3DO15371 CHD2-228ENST00000637613 986 ntTSL 53.6□□□□□ -1.831e-6■□□□□ 9.3
EIF3DO15371 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.531e-323■□□□□ 9.3
EIF3DO15371 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.531e-323■□□□□ 9.3
EIF3DO15371 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.011e-323■□□□□ 9.3
EIF3DO15371 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC12.92□□□□□ -0.341e-323■□□□□ 9.3
EIF3DO15371 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.919e-22■□□□□ 9.3
EIF3DO15371 HNRNPK-207ENST00000472778 822 ntTSL 37.05□□□□□ -1.289e-22■□□□□ 9.3
EIF3DO15371 HNRNPK-209ENST00000483135 900 ntTSL 27.05□□□□□ -1.289e-22■□□□□ 9.3
EIF3DO15371 DICER1-213ENST00000554367 897 ntTSL 411.55□□□□□ -0.562e-6■□□□□ 9.3
EIF3DO15371 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.972e-6■□□□□ 9.3
EIF3DO15371 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.78□□□□□ -12e-6■□□□□ 9.3
EIF3DO15371 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.22e-6■□□□□ 9.3
EIF3DO15371 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.242e-6■□□□□ 9.3
EIF3DO15371 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.32□□□□□ -1.562e-6■□□□□ 9.3
EIF3DO15371 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.832e-6■□□□□ 9.3
EIF3DO15371 FGA-203ENST00000622532 1130 ntTSL 5 BASIC11.01□□□□□ -0.651e-40■□□□□ 9.2
EIF3DO15371 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC9.86□□□□□ -0.831e-40■□□□□ 9.2
EIF3DO15371 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.191e-40■□□□□ 9.2
EIF3DO15371 PKD1-223ENST00000561668 665 ntTSL 320.33■□□□□ 0.853e-6■□□□□ 9.2
EIF3DO15371 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.13□□□□□ -0.157e-16■□□□□ 9.2
EIF3DO15371 SEPT9-229ENST00000590576 583 ntTSL 321.99■■□□□ 1.115e-7■□□□□ 9.2
EIF3DO15371 SEPT9-222ENST00000589070 582 ntTSL 319.89■□□□□ 0.775e-7■□□□□ 9.2
EIF3DO15371 SEPT9-217ENST00000587237 548 ntTSL 515.35■□□□□ 0.055e-7■□□□□ 9.2
EIF3DO15371 SEPT9-240ENST00000591833 576 ntTSL 415.33■□□□□ 0.045e-7■□□□□ 9.2
EIF3DO15371 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.993e-6■□□□□ 9.2
EIF3DO15371 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.993e-6■□□□□ 9.2
EIF3DO15371 SEPT9-218ENST00000587514 540 ntTSL 523.74■■□□□ 1.395e-7■□□□□ 9.2
EIF3DO15371 SYPL1-206ENST00000483448 478 ntTSL 423.2■■□□□ 1.33e-6■□□□□ 9.2
EIF3DO15371 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.78■■□□□ 1.243e-6■□□□□ 9.2
EIF3DO15371 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.983e-6■□□□□ 9.2
EIF3DO15371 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.963e-6■□□□□ 9.2
EIF3DO15371 STMN3-203ENST00000631920 970 ntTSL 220.75■□□□□ 0.913e-6■□□□□ 9.2
EIF3DO15371 NOP2-210ENST00000538697 569 ntTSL 420.27■□□□□ 0.843e-6■□□□□ 9.2
EIF3DO15371 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20■□□□□ 0.793e-6■□□□□ 9.2
EIF3DO15371 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.753e-6■□□□□ 9.2
EIF3DO15371 NOP2-219ENST00000545492 657 ntTSL 218.84■□□□□ 0.613e-6■□□□□ 9.2
EIF3DO15371 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.613e-6■□□□□ 9.2
EIF3DO15371 NOP2-214ENST00000542867 848 ntTSL 517.89■□□□□ 0.453e-6■□□□□ 9.2
EIF3DO15371 M6PR-211ENST00000543845 596 ntTSL 317.82■□□□□ 0.443e-6■□□□□ 9.2
EIF3DO15371 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.433e-6■□□□□ 9.2
Retrieved 100 of 4,069 protein–RNA pairs in 209.5 ms