RNA–Protein interactions for RNA: ENST00000421471.1

MCM3-203, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 5

Gene MCM3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-203ENST00000421471 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
MCM3-203ENST00000421471 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
MCM3-203ENST00000421471 ABCC9O60706 1549 aa22.06■■□□□ 1.12
MCM3-203ENST00000421471 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
MCM3-203ENST00000421471 NACADO15069 1562 aa21.06■□□□□ 0.96
MCM3-203ENST00000421471 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.94
MCM3-203ENST00000421471 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
MCM3-203ENST00000421471 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
MCM3-203ENST00000421471 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
MCM3-203ENST00000421471 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
MCM3-203ENST00000421471 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
MCM3-203ENST00000421471 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
MCM3-203ENST00000421471 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
MCM3-203ENST00000421471 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
MCM3-203ENST00000421471 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
MCM3-203ENST00000421471 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
MCM3-203ENST00000421471 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.79
MCM3-203ENST00000421471 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
MCM3-203ENST00000421471 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
MCM3-203ENST00000421471 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
MCM3-203ENST00000421471 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
MCM3-203ENST00000421471 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
MCM3-203ENST00000421471 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
MCM3-203ENST00000421471 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
MCM3-203ENST00000421471 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
MCM3-203ENST00000421471 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
MCM3-203ENST00000421471 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
MCM3-203ENST00000421471 WIZO95785 1651 aa19.09■□□□□ 0.65
MCM3-203ENST00000421471 NESP48681 1621 aa19.07■□□□□ 0.64
MCM3-203ENST00000421471 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
MCM3-203ENST00000421471 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
MCM3-203ENST00000421471 CUX2O14529 1486 aa18.95■□□□□ 0.62
MCM3-203ENST00000421471 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
MCM3-203ENST00000421471 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
MCM3-203ENST00000421471 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
MCM3-203ENST00000421471 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
MCM3-203ENST00000421471 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
MCM3-203ENST00000421471 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
MCM3-203ENST00000421471 CFTRP13569 1480 aa18.69■□□□□ 0.58
MCM3-203ENST00000421471 WDR62O43379 1518 aa18.67■□□□□ 0.58
MCM3-203ENST00000421471 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
MCM3-203ENST00000421471 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
MCM3-203ENST00000421471 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
MCM3-203ENST00000421471 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
MCM3-203ENST00000421471 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
MCM3-203ENST00000421471 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
MCM3-203ENST00000421471 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
MCM3-203ENST00000421471 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
MCM3-203ENST00000421471 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
MCM3-203ENST00000421471 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
MCM3-203ENST00000421471 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
MCM3-203ENST00000421471 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
MCM3-203ENST00000421471 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
MCM3-203ENST00000421471 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
MCM3-203ENST00000421471 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
MCM3-203ENST00000421471 CUX1P39880 1505 aa18.12■□□□□ 0.49
MCM3-203ENST00000421471 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
MCM3-203ENST00000421471 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
MCM3-203ENST00000421471 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
MCM3-203ENST00000421471 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
MCM3-203ENST00000421471 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.482e-8■■■■■ 47.5
MCM3-203ENST00000421471 CHD1O14646 1710 aa18.02■□□□□ 0.48
MCM3-203ENST00000421471 SOGA1O94964 1423 aa17.97■□□□□ 0.47
MCM3-203ENST00000421471 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
MCM3-203ENST00000421471 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
MCM3-203ENST00000421471 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
MCM3-203ENST00000421471 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
MCM3-203ENST00000421471 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
MCM3-203ENST00000421471 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
MCM3-203ENST00000421471 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
MCM3-203ENST00000421471 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
MCM3-203ENST00000421471 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
MCM3-203ENST00000421471 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
MCM3-203ENST00000421471 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
MCM3-203ENST00000421471 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
MCM3-203ENST00000421471 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
MCM3-203ENST00000421471 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
MCM3-203ENST00000421471 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
MCM3-203ENST00000421471 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
MCM3-203ENST00000421471 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
MCM3-203ENST00000421471 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
MCM3-203ENST00000421471 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
MCM3-203ENST00000421471 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
MCM3-203ENST00000421471 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
MCM3-203ENST00000421471 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
MCM3-203ENST00000421471 FBLN2P98095 1184 aa17.68■□□□□ 0.42
MCM3-203ENST00000421471 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
MCM3-203ENST00000421471 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
MCM3-203ENST00000421471 CEP170Q5SW79 1584 aa17.63■□□□□ 0.41
MCM3-203ENST00000421471 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
MCM3-203ENST00000421471 NUP160Q12769 1436 aa17.6■□□□□ 0.41
MCM3-203ENST00000421471 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
MCM3-203ENST00000421471 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
MCM3-203ENST00000421471 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
MCM3-203ENST00000421471 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
MCM3-203ENST00000421471 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
MCM3-203ENST00000421471 CUL7Q14999 1698 aa17.46■□□□□ 0.39
MCM3-203ENST00000421471 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
MCM3-203ENST00000421471 IGF1RP08069 1367 aa17.4■□□□□ 0.38
MCM3-203ENST00000421471 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms