RNA–Protein interactions for RNA: ENST00000419835.7

MCM3-202, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 2 BASIC

Gene MCM3, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-202ENST00000419835 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
MCM3-202ENST00000419835 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
MCM3-202ENST00000419835 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
MCM3-202ENST00000419835 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
MCM3-202ENST00000419835 ABCC9O60706 1549 aa22.82■■□□□ 1.24
MCM3-202ENST00000419835 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
MCM3-202ENST00000419835 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
MCM3-202ENST00000419835 NACADO15069 1562 aa22.15■■□□□ 1.14
MCM3-202ENST00000419835 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
MCM3-202ENST00000419835 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
MCM3-202ENST00000419835 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
MCM3-202ENST00000419835 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
MCM3-202ENST00000419835 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
MCM3-202ENST00000419835 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.04
MCM3-202ENST00000419835 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
MCM3-202ENST00000419835 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
MCM3-202ENST00000419835 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
MCM3-202ENST00000419835 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
MCM3-202ENST00000419835 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
MCM3-202ENST00000419835 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
MCM3-202ENST00000419835 WIZO95785 1651 aa21.07■□□□□ 0.96
MCM3-202ENST00000419835 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
MCM3-202ENST00000419835 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
MCM3-202ENST00000419835 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
MCM3-202ENST00000419835 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
MCM3-202ENST00000419835 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
MCM3-202ENST00000419835 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
MCM3-202ENST00000419835 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
MCM3-202ENST00000419835 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
MCM3-202ENST00000419835 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
MCM3-202ENST00000419835 HRCP23327 699 aa20.49■□□□□ 0.87
MCM3-202ENST00000419835 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
MCM3-202ENST00000419835 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
MCM3-202ENST00000419835 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
MCM3-202ENST00000419835 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
MCM3-202ENST00000419835 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
MCM3-202ENST00000419835 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
MCM3-202ENST00000419835 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
MCM3-202ENST00000419835 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
MCM3-202ENST00000419835 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
MCM3-202ENST00000419835 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
MCM3-202ENST00000419835 CFTRP13569 1480 aa20.03■□□□□ 0.8
MCM3-202ENST00000419835 NESP48681 1621 aa20.02■□□□□ 0.79
MCM3-202ENST00000419835 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
MCM3-202ENST00000419835 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
MCM3-202ENST00000419835 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
MCM3-202ENST00000419835 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
MCM3-202ENST00000419835 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
MCM3-202ENST00000419835 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
MCM3-202ENST00000419835 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.77
MCM3-202ENST00000419835 SOGA1O94964 1423 aa19.81■□□□□ 0.76
MCM3-202ENST00000419835 CUX1P39880 1505 aa19.8■□□□□ 0.76
MCM3-202ENST00000419835 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
MCM3-202ENST00000419835 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
MCM3-202ENST00000419835 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
MCM3-202ENST00000419835 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
MCM3-202ENST00000419835 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
MCM3-202ENST00000419835 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
MCM3-202ENST00000419835 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
MCM3-202ENST00000419835 MYT1Q01538 1121 aa19.7■□□□□ 0.74
MCM3-202ENST00000419835 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
MCM3-202ENST00000419835 EEA1Q15075 1411 aa19.64■□□□□ 0.73
MCM3-202ENST00000419835 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
MCM3-202ENST00000419835 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
MCM3-202ENST00000419835 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
MCM3-202ENST00000419835 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
MCM3-202ENST00000419835 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
MCM3-202ENST00000419835 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
MCM3-202ENST00000419835 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
MCM3-202ENST00000419835 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
MCM3-202ENST00000419835 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.71
MCM3-202ENST00000419835 CUX2O14529 1486 aa19.51■□□□□ 0.71
MCM3-202ENST00000419835 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
MCM3-202ENST00000419835 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
MCM3-202ENST00000419835 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
MCM3-202ENST00000419835 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
MCM3-202ENST00000419835 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
MCM3-202ENST00000419835 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
MCM3-202ENST00000419835 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
MCM3-202ENST00000419835 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
MCM3-202ENST00000419835 KIF21BO75037 1637 aa19.39■□□□□ 0.69
MCM3-202ENST00000419835 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
MCM3-202ENST00000419835 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
MCM3-202ENST00000419835 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
MCM3-202ENST00000419835 WDR62O43379 1518 aa19.31■□□□□ 0.68
MCM3-202ENST00000419835 WDR97A6NE52 1622 aa19.31■□□□□ 0.68
MCM3-202ENST00000419835 IGF1RP08069 1367 aa19.3■□□□□ 0.68
MCM3-202ENST00000419835 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
MCM3-202ENST00000419835 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
MCM3-202ENST00000419835 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.679e-8■■■■■ 48.9
MCM3-202ENST00000419835 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
MCM3-202ENST00000419835 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
MCM3-202ENST00000419835 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
MCM3-202ENST00000419835 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
MCM3-202ENST00000419835 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
MCM3-202ENST00000419835 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
MCM3-202ENST00000419835 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
MCM3-202ENST00000419835 CLIP1P30622 1438 aa19.12■□□□□ 0.65
MCM3-202ENST00000419835 CUL7Q14999 1698 aa19.11■□□□□ 0.65
MCM3-202ENST00000419835 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms