RNA–Protein interactions for RNA: ENST00000403106.7

FGA-202, Transcript of fibrinogen alpha chain, humanhuman

TSL 1 (best) BASIC

Gene FGA, Length 2,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGA-202ENST00000403106 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
FGA-202ENST00000403106 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
FGA-202ENST00000403106 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
FGA-202ENST00000403106 POTEDQ86YR6 584 aa17■□□□□ 0.31
FGA-202ENST00000403106 ABCC9O60706 1549 aa16.97■□□□□ 0.31
FGA-202ENST00000403106 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
FGA-202ENST00000403106 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
FGA-202ENST00000403106 RB1CC1Q8TDY2 1594 aa16.4■□□□□ 0.22
FGA-202ENST00000403106 NACADO15069 1562 aa16.32■□□□□ 0.2
FGA-202ENST00000403106 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
FGA-202ENST00000403106 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
FGA-202ENST00000403106 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
FGA-202ENST00000403106 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
FGA-202ENST00000403106 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
FGA-202ENST00000403106 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
FGA-202ENST00000403106 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.12
FGA-202ENST00000403106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
FGA-202ENST00000403106 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
FGA-202ENST00000403106 SCRIBQ14160 1630 aa15.49■□□□□ 0.07
FGA-202ENST00000403106 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
FGA-202ENST00000403106 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
FGA-202ENST00000403106 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
FGA-202ENST00000403106 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
FGA-202ENST00000403106 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
FGA-202ENST00000403106 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ -0
FGA-202ENST00000403106 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
FGA-202ENST00000403106 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
FGA-202ENST00000403106 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
FGA-202ENST00000403106 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
FGA-202ENST00000403106 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
FGA-202ENST00000403106 WIZO95785 1651 aa14.91□□□□□ -0.02
FGA-202ENST00000403106 CUX2O14529 1486 aa14.88□□□□□ -0.03
FGA-202ENST00000403106 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
FGA-202ENST00000403106 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
FGA-202ENST00000403106 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
FGA-202ENST00000403106 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
FGA-202ENST00000403106 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
FGA-202ENST00000403106 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
FGA-202ENST00000403106 DNAJC5Q9H3Z4 198 aa14.74□□□□□ -0.05
FGA-202ENST00000403106 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.05
FGA-202ENST00000403106 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
FGA-202ENST00000403106 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
FGA-202ENST00000403106 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
FGA-202ENST00000403106 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
FGA-202ENST00000403106 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
FGA-202ENST00000403106 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
FGA-202ENST00000403106 HRCP23327 699 aa14.55□□□□□ -0.08
FGA-202ENST00000403106 NESP48681 1621 aa14.54□□□□□ -0.08
FGA-202ENST00000403106 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
FGA-202ENST00000403106 MSH5O43196 834 aa14.47□□□□□ -0.09
FGA-202ENST00000403106 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
FGA-202ENST00000403106 FOXD1Q16676 465 aa14.44□□□□□ -0.1
FGA-202ENST00000403106 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
FGA-202ENST00000403106 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
FGA-202ENST00000403106 WDR62O43379 1518 aa14.41□□□□□ -0.1
FGA-202ENST00000403106 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
FGA-202ENST00000403106 TRIM26Q12899 539 aaPredicted RBP14.39□□□□□ -0.11
FGA-202ENST00000403106 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
FGA-202ENST00000403106 EEA1Q15075 1411 aa14.35□□□□□ -0.11
FGA-202ENST00000403106 CFTRP13569 1480 aa14.35□□□□□ -0.11
FGA-202ENST00000403106 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
FGA-202ENST00000403106 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
FGA-202ENST00000403106 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
FGA-202ENST00000403106 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
FGA-202ENST00000403106 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
FGA-202ENST00000403106 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
FGA-202ENST00000403106 SOGA1O94964 1423 aa14.19□□□□□ -0.14
FGA-202ENST00000403106 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
FGA-202ENST00000403106 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
FGA-202ENST00000403106 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
FGA-202ENST00000403106 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
FGA-202ENST00000403106 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
FGA-202ENST00000403106 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
FGA-202ENST00000403106 KIF21BO75037 1637 aa14.13□□□□□ -0.15
FGA-202ENST00000403106 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
FGA-202ENST00000403106 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
FGA-202ENST00000403106 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
FGA-202ENST00000403106 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
FGA-202ENST00000403106 CUX1P39880 1505 aa14.05□□□□□ -0.16
FGA-202ENST00000403106 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
FGA-202ENST00000403106 CEP162Q5TB80 1403 aa14.05□□□□□ -0.16
FGA-202ENST00000403106 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
FGA-202ENST00000403106 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
FGA-202ENST00000403106 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
FGA-202ENST00000403106 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
FGA-202ENST00000403106 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
FGA-202ENST00000403106 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
FGA-202ENST00000403106 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
FGA-202ENST00000403106 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
FGA-202ENST00000403106 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
FGA-202ENST00000403106 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
FGA-202ENST00000403106 CLIP1P30622 1438 aa13.87□□□□□ -0.19
FGA-202ENST00000403106 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
FGA-202ENST00000403106 RIMBP3BA6NNM3 1639 aa13.87□□□□□ -0.19
FGA-202ENST00000403106 RIMBP3Q9UFD9 1639 aa13.87□□□□□ -0.19
FGA-202ENST00000403106 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
FGA-202ENST00000403106 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
FGA-202ENST00000403106 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
FGA-202ENST00000403106 CHD1O14646 1710 aa13.82□□□□□ -0.2
FGA-202ENST00000403106 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms