Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL138724.1-201ENST00000606771 1088 ntBASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 AP003733.4-201ENST00000623785 1697 ntBASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 AC105265.2-201ENST00000467189 838 ntBASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 AC011298.3-201ENST00000615796 283 ntBASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRIT1Q9P2V4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.02■■□□□ 1.11
LRIT1Q9P2V4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LRIT1Q9P2V4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.02■■□□□ 1.11
LRIT1Q9P2V4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 ALDH1A3-203ENST00000557963 1670 ntBASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.01■■□□□ 1.11
LRIT1Q9P2V4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22■■□□□ 1.11
LRIT1Q9P2V4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRIT1Q9P2V4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRIT1Q9P2V4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22■■□□□ 1.11
LRIT1Q9P2V4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRIT1Q9P2V4 AC091305.1-201ENST00000479476 895 ntBASIC22■■□□□ 1.11
LRIT1Q9P2V4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22■■□□□ 1.11
LRIT1Q9P2V4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRIT1Q9P2V4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22■■□□□ 1.11
LRIT1Q9P2V4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRIT1Q9P2V4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 AC135731.1-201ENST00000569415 2548 ntBASIC21.99■■□□□ 1.11
LRIT1Q9P2V4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 RARRES2P6-201ENST00000567333 442 ntBASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 AC009086.3-201ENST00000623486 1008 ntBASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRIT1Q9P2V4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 AC006455.2-201ENST00000429931 906 ntBASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRIT1Q9P2V4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 RASA4CP-201ENST00000424092 1398 ntBASIC21.96■■□□□ 1.11
LRIT1Q9P2V4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 AC027682.1-201ENST00000562846 899 ntBASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 AC008764.7-201ENST00000593779 1081 ntBASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 CA15P2-201ENST00000611168 834 ntBASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.95■■□□□ 1.1
LRIT1Q9P2V4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRIT1Q9P2V4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRIT1Q9P2V4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.94■■□□□ 1.1
LRIT1Q9P2V4 MIR3181-201ENST00000578512 73 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms