Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREM2Q9NZC2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 AC131274.2-201ENST00000580697 1507 ntBASIC19.47■□□□□ 0.71
TREM2Q9NZC2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREM2Q9NZC2 AC004812.2-201ENST00000611079 2094 ntBASIC19.47■□□□□ 0.71
TREM2Q9NZC2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 MIR6724-1-201ENST00000616420 92 ntBASIC19.46■□□□□ 0.71
TREM2Q9NZC2 MIR6724-2-201ENST00000616483 92 ntBASIC19.46■□□□□ 0.71
TREM2Q9NZC2 MIR6724-4-201ENST00000617390 92 ntBASIC19.46■□□□□ 0.71
TREM2Q9NZC2 MIR6724-3-201ENST00000622482 92 ntBASIC19.46■□□□□ 0.71
TREM2Q9NZC2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TREM2Q9NZC2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
TREM2Q9NZC2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREM2Q9NZC2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 AL022069.1-201ENST00000568025 1636 ntBASIC19.43■□□□□ 0.7
TREM2Q9NZC2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 AC004448.1-201ENST00000458332 883 ntBASIC19.43■□□□□ 0.7
TREM2Q9NZC2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 AL117332.1-201ENST00000622628 974 ntBASIC19.43■□□□□ 0.7
TREM2Q9NZC2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 AC019069.1-201ENST00000610008 1333 ntBASIC19.43■□□□□ 0.7
TREM2Q9NZC2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TREM2Q9NZC2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 AL356740.2-201ENST00000601559 647 ntBASIC19.42■□□□□ 0.7
TREM2Q9NZC2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TREM2Q9NZC2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.41■□□□□ 0.7
TREM2Q9NZC2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms