Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.64■□□□□ 0.58
R3HDM4Q96D70 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 AL356441.2-201ENST00000443009 864 ntBASIC18.64■□□□□ 0.57
R3HDM4Q96D70 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM4Q96D70 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HDM4Q96D70 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.62■□□□□ 0.57
R3HDM4Q96D70 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM4Q96D70 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM4Q96D70 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 KRT125P-201ENST00000546827 989 ntBASIC18.6■□□□□ 0.57
R3HDM4Q96D70 Z92544.1-202ENST00000571933 1220 ntBASIC18.6■□□□□ 0.57
R3HDM4Q96D70 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM4Q96D70 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 C9orf163-202ENST00000624034 2573 ntBASIC18.59■□□□□ 0.57
R3HDM4Q96D70 AL161729.1-201ENST00000604104 1402 ntBASIC18.59■□□□□ 0.57
R3HDM4Q96D70 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HDM4Q96D70 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HDM4Q96D70 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.58■□□□□ 0.56
R3HDM4Q96D70 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms