Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 AC024257.2-201ENST00000549699 147 ntBASIC25.67■■□□□ 1.7
RETREG2Q8NC44 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.67■■□□□ 1.7
RETREG2Q8NC44 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 AC004448.1-201ENST00000458332 883 ntBASIC25.66■■□□□ 1.7
RETREG2Q8NC44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RETREG2Q8NC44 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RETREG2Q8NC44 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.64■■□□□ 1.7
RETREG2Q8NC44 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.64■■□□□ 1.69
RETREG2Q8NC44 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
RETREG2Q8NC44 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 AC026271.2-201ENST00000428091 497 ntBASIC25.62■■□□□ 1.69
RETREG2Q8NC44 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.62■■□□□ 1.69
RETREG2Q8NC44 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 DUX4L19-201ENST00000557448 1267 ntBASIC25.61■■□□□ 1.69
RETREG2Q8NC44 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RETREG2Q8NC44 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 MIR5787-201ENST00000611784 55 ntBASIC25.6■■□□□ 1.69
RETREG2Q8NC44 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RETREG2Q8NC44 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
RETREG2Q8NC44 AC005703.6-201ENST00000623265 1329 ntBASIC25.59■■□□□ 1.69
RETREG2Q8NC44 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RETREG2Q8NC44 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RETREG2Q8NC44 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 AC105265.2-201ENST00000467189 838 ntBASIC25.57■■□□□ 1.68
RETREG2Q8NC44 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.57■■□□□ 1.68
RETREG2Q8NC44 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.57■■□□□ 1.68
RETREG2Q8NC44 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RETREG2Q8NC44 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms