Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
MTHFRP42898 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MTHFRP42898 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.84■■□□□ 1.41
MTHFRP42898 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MTHFRP42898 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
MTHFRP42898 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MTHFRP42898 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
MTHFRP42898 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.83■■□□□ 1.41
MTHFRP42898 SLC47A1P1-202ENST00000449666 945 ntBASIC23.83■■□□□ 1.41
MTHFRP42898 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.83■■□□□ 1.4
MTHFRP42898 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.83■■□□□ 1.4
MTHFRP42898 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.82■■□□□ 1.4
MTHFRP42898 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.82■■□□□ 1.4
MTHFRP42898 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
MTHFRP42898 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MTHFRP42898 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.82■■□□□ 1.4
MTHFRP42898 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MTHFRP42898 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.82■■□□□ 1.4
MTHFRP42898 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MTHFRP42898 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.82■■□□□ 1.4
MTHFRP42898 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.82■■□□□ 1.4
MTHFRP42898 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.82■■□□□ 1.4
MTHFRP42898 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MTHFRP42898 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MTHFRP42898 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.81■■□□□ 1.4
MTHFRP42898 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.81■■□□□ 1.4
MTHFRP42898 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MTHFRP42898 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.81■■□□□ 1.4
MTHFRP42898 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MTHFRP42898 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.81■■□□□ 1.4
MTHFRP42898 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.81■■□□□ 1.4
MTHFRP42898 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.81■■□□□ 1.4
MTHFRP42898 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.81■■□□□ 1.4
MTHFRP42898 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MTHFRP42898 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.8■■□□□ 1.4
MTHFRP42898 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.8■■□□□ 1.4
MTHFRP42898 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.8■■□□□ 1.4
MTHFRP42898 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MTHFRP42898 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MTHFRP42898 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.8■■□□□ 1.4
MTHFRP42898 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
MTHFRP42898 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.8■■□□□ 1.4
MTHFRP42898 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MTHFRP42898 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.79■■□□□ 1.4
MTHFRP42898 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MTHFRP42898 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.79■■□□□ 1.4
MTHFRP42898 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MTHFRP42898 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.79■■□□□ 1.4
MTHFRP42898 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.79■■□□□ 1.4
MTHFRP42898 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MTHFRP42898 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.79■■□□□ 1.4
MTHFRP42898 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MTHFRP42898 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
MTHFRP42898 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
MTHFRP42898 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MTHFRP42898 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MTHFRP42898 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.78■■□□□ 1.4
MTHFRP42898 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.78■■□□□ 1.4
MTHFRP42898 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.78■■□□□ 1.4
MTHFRP42898 AL358852.1-201ENST00000623174 1268 ntBASIC23.78■■□□□ 1.4
MTHFRP42898 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.78■■□□□ 1.4
MTHFRP42898 AL031602.1-201ENST00000633169 911 ntBASIC23.78■■□□□ 1.4
MTHFRP42898 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MTHFRP42898 TSPY26P-201ENST00000476365 1326 ntBASIC23.78■■□□□ 1.4
MTHFRP42898 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.77■■□□□ 1.4
MTHFRP42898 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
MTHFRP42898 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.77■■□□□ 1.4
MTHFRP42898 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
MTHFRP42898 MIR6089-201ENST00000616698 64 ntBASIC23.77■■□□□ 1.4
MTHFRP42898 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MTHFRP42898 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
MTHFRP42898 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MTHFRP42898 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
MTHFRP42898 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
MTHFRP42898 AC123595.1-201ENST00000440769 1046 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L2-201ENST00000561772 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 pRNA.6-201ENST00000610482 90 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 pRNA.5-201ENST00000612139 90 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.76■■□□□ 1.39
MTHFRP42898 pRNA.11-201ENST00000618423 90 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 pRNA.13-201ENST00000619112 90 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L6-201ENST00000626483 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L1-201ENST00000627662 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L8-201ENST00000629013 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L3-201ENST00000630187 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L7-201ENST00000630678 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DUX4L5-201ENST00000630834 1275 ntBASIC23.76■■□□□ 1.39
MTHFRP42898 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MTHFRP42898 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MTHFRP42898 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.76■■□□□ 1.39
MTHFRP42898 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MTHFRP42898 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
MTHFRP42898 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MTHFRP42898 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MTHFRP42898 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.75■■□□□ 1.39
MTHFRP42898 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MTHFRP42898 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.75■■□□□ 1.39
MTHFRP42898 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MTHFRP42898 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
MTHFRP42898 AC027612.3-201ENST00000413684 1047 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms