Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 TSL1YML100W 3297 nt6.25□□□□□ -1.41
SSM4P40318 THS1YIL078W 2205 nt6.25□□□□□ -1.41
SSM4P40318 AIM7YDR063W 450 nt6.25□□□□□ -1.41
SSM4P40318 TVP38YKR088C 1014 nt6.25□□□□□ -1.41
SSM4P40318 RRN9YMR270C 1098 nt6.25□□□□□ -1.41
SSM4P40318 STE13YOR219C 2796 nt6.24□□□□□ -1.41
SSM4P40318 ASN1YPR145W 1719 nt6.24□□□□□ -1.41
SSM4P40318 HMLALPHA1YCL066W 528 nt6.24□□□□□ -1.41
SSM4P40318 MATALPHA1YCR040W 528 nt6.24□□□□□ -1.41
SSM4P40318 YIR043CYIR043C 693 nt6.24□□□□□ -1.41
SSM4P40318 FMP46YKR049C 402 nt6.24□□□□□ -1.41
SSM4P40318 PHA2YNL316C 1005 nt6.24□□□□□ -1.41
SSM4P40318 CPA1YOR303W 1236 nt6.24□□□□□ -1.41
SSM4P40318 PRE2YPR103W 864 nt6.24□□□□□ -1.41
SSM4P40318 MKC7YDR144C 1791 nt6.23□□□□□ -1.41
SSM4P40318 FLO8YER109C 2400 nt6.23□□□□□ -1.41
SSM4P40318 FRT2YAL028W 1587 nt6.23□□□□□ -1.41
SSM4P40318 UTP9YHR196W 1728 nt6.23□□□□□ -1.41
SSM4P40318 UPS3YDR185C 540 nt6.23□□□□□ -1.41
SSM4P40318 LOH1YJL038C 660 nt6.23□□□□□ -1.41
SSM4P40318 SCP1YOR367W 603 nt6.23□□□□□ -1.41
SSM4P40318 YBR138CYBR138C 1575 nt6.22□□□□□ -1.41
SSM4P40318 GPI18YBR004C 1302 nt6.22□□□□□ -1.41
SSM4P40318 TIP41YPR040W 1071 nt6.22□□□□□ -1.41
SSM4P40318 SPN1YPR133C 1233 nt6.22□□□□□ -1.41
SSM4P40318 IMA3YIL172C 1770 nt6.21□□□□□ -1.41
SSM4P40318 IMA4YJL221C 1770 nt6.21□□□□□ -1.41
SSM4P40318 JHD2YJR119C 2187 nt6.21□□□□□ -1.42
SSM4P40318 OCA5YHL029C 2040 nt6.21□□□□□ -1.42
SSM4P40318 PER1YCR044C 1074 nt6.21□□□□□ -1.42
SSM4P40318 TMA17YDL110C 453 nt6.21□□□□□ -1.42
SSM4P40318 COQ4YDR204W 1008 nt6.21□□□□□ -1.42
SSM4P40318 YIL021C-AYIL021C-A 270 nt6.21□□□□□ -1.42
SSM4P40318 YOL079WYOL079W 399 nt6.21□□□□□ -1.42
SSM4P40318 YEL020CYEL020C 1683 nt6.2□□□□□ -1.42
SSM4P40318 TUP1YCR084C 2142 nt6.2□□□□□ -1.42
SSM4P40318 SUL2YLR092W 2682 nt6.19□□□□□ -1.42
SSM4P40318 CYM1YDR430C 2970 nt6.19□□□□□ -1.42
SSM4P40318 EAR1YMR171C 1653 nt6.19□□□□□ -1.42
SSM4P40318 HXT7YDR342C 1713 nt6.19□□□□□ -1.42
SSM4P40318 HXT6YDR343C 1713 nt6.19□□□□□ -1.42
SSM4P40318 RNA15YGL044C 891 nt6.19□□□□□ -1.42
SSM4P40318 MTF1YMR228W 1026 nt6.19□□□□□ -1.42
SSM4P40318 COG5YNL051W 1212 nt6.19□□□□□ -1.42
SSM4P40318 MDY2YOL111C 639 nt6.19□□□□□ -1.42
SSM4P40318 YOR1YGR281W 4434 nt6.19□□□□□ -1.42
SSM4P40318 VTH1YIL173W 4650 nt6.19□□□□□ -1.42
SSM4P40318 VTH2YJL222W 4650 nt6.19□□□□□ -1.42
SSM4P40318 TRM11YOL124C 1302 nt6.19□□□□□ -1.42
SSM4P40318 GCR1YPL075W 2358 nt6.18□□□□□ -1.42
SSM4P40318 URA7YBL039C 1740 nt6.18□□□□□ -1.42
SSM4P40318 IPK1YDR315C 846 nt6.18□□□□□ -1.42
SSM4P40318 RIP1YEL024W 648 nt6.18□□□□□ -1.42
SSM4P40318 YEL045CYEL045C 426 nt6.18□□□□□ -1.42
SSM4P40318 BUD25YER014C-A 462 nt6.18□□□□□ -1.42
SSM4P40318 ARC40YBR234C 1155 nt6.18□□□□□ -1.42
SSM4P40318 MET4YNL103W 2019 nt6.17□□□□□ -1.42
SSM4P40318 WHI4YDL224C 1950 nt6.17□□□□□ -1.42
SSM4P40318 YCR006CYCR006C 474 nt6.17□□□□□ -1.42
SSM4P40318 GPP1YIL053W 753 nt6.17□□□□□ -1.42
SSM4P40318 YLR407WYLR407W 687 nt6.17□□□□□ -1.42
SSM4P40318 RPN6YDL097C 1305 nt6.17□□□□□ -1.42
SSM4P40318 KRE28YDR532C 1158 nt6.16□□□□□ -1.42
SSM4P40318 UBC8YEL012W 657 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)CtQ(UUG)C 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)D1tQ(UUG)D1 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)D2tQ(UUG)D2 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)D3tQ(UUG)D3 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)E1tQ(UUG)E1 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)HtQ(UUG)H 72 nt6.16□□□□□ -1.42
SSM4P40318 tQ(UUG)LtQ(UUG)L 72 nt6.16□□□□□ -1.42
SSM4P40318 YMR135W-AYMR135W-A 534 nt6.16□□□□□ -1.42
SSM4P40318 SUA7YPR086W 1038 nt6.16□□□□□ -1.42
SSM4P40318 PEX32YBR168W 1242 nt6.16□□□□□ -1.42
SSM4P40318 YLH47YPR125W 1365 nt6.16□□□□□ -1.42
SSM4P40318 PMA1YGL008C 2757 nt6.15□□□□□ -1.42
SSM4P40318 BNA6YFR047C 888 nt6.15□□□□□ -1.43
SSM4P40318 COX17YLL009C 210 nt6.15□□□□□ -1.43
SSM4P40318 SEC72YLR292C 582 nt6.15□□□□□ -1.43
SSM4P40318 YOR131CYOR131C 657 nt6.15□□□□□ -1.43
SSM4P40318 YMD8YML038C 1329 nt6.15□□□□□ -1.43
SSM4P40318 RAD52YML032C 1416 nt6.15□□□□□ -1.43
SSM4P40318 ARH1YDR376W 1482 nt6.15□□□□□ -1.43
SSM4P40318 DPB4YDR121W 591 nt6.14□□□□□ -1.43
SSM4P40318 ARC1YGL105W 1131 nt6.14□□□□□ -1.43
SSM4P40318 YIM1YMR152W 1098 nt6.14□□□□□ -1.43
SSM4P40318 MMR1YLR190W 1476 nt6.14□□□□□ -1.43
SSM4P40318 TDA7YNL176C 1911 nt6.14□□□□□ -1.43
SSM4P40318 DIT2YDR402C 1470 nt6.13□□□□□ -1.43
SSM4P40318 snR7-SsnR7-S 179 nt6.13□□□□□ -1.43
SSM4P40318 RRP1YDR087C 837 nt6.13□□□□□ -1.43
SSM4P40318 SPC42YKL042W 1092 nt6.13□□□□□ -1.43
SSM4P40318 PEP5YMR231W 3090 nt6.13□□□□□ -1.43
SSM4P40318 NUP2YLR335W 2163 nt6.13□□□□□ -1.43
SSM4P40318 PRD1YCL057W 2139 nt6.13□□□□□ -1.43
SSM4P40318 PEX29YDR479C 1665 nt6.12□□□□□ -1.43
SSM4P40318 YDR132CYDR132C 1488 nt6.12□□□□□ -1.43
SSM4P40318 HIS4YCL030C 2400 nt6.12□□□□□ -1.43
SSM4P40318 RAM1YDL090C 1296 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)CtK(CUU)C 73 nt6.12□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms