Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
LINGO3P0C6S8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINGO3P0C6S8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINGO3P0C6S8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINGO3P0C6S8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINGO3P0C6S8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 SPCS2P3-201ENST00000500401 656 ntBASIC21.8■■□□□ 1.08
LINGO3P0C6S8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINGO3P0C6S8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 AC129492.7-201ENST00000622992 756 ntBASIC21.79■■□□□ 1.08
LINGO3P0C6S8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINGO3P0C6S8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
LINGO3P0C6S8 GUSBP5-202ENST00000510805 1989 ntBASIC21.78■■□□□ 1.08
LINGO3P0C6S8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINGO3P0C6S8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
LINGO3P0C6S8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
LINGO3P0C6S8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 KRT18P10-201ENST00000388836 1287 ntBASIC21.76■■□□□ 1.07
LINGO3P0C6S8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 DUX4L9-201ENST00000449051 1259 ntBASIC21.76■■□□□ 1.07
LINGO3P0C6S8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINGO3P0C6S8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINGO3P0C6S8 ECEL1P1-201ENST00000373592 1742 ntBASIC21.75■■□□□ 1.07
LINGO3P0C6S8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 AC018755.3-202ENST00000596210 929 ntBASIC21.74■■□□□ 1.07
LINGO3P0C6S8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
LINGO3P0C6S8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINGO3P0C6S8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 MIR6765-201ENST00000614092 87 ntBASIC21.72■■□□□ 1.07
LINGO3P0C6S8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms