Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT4O95628 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT4O95628 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CNOT4O95628 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CNOT4O95628 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CNOT4O95628 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT4O95628 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT4O95628 AL512631.2-201ENST00000604634 923 ntBASIC20.06■□□□□ 0.8
CNOT4O95628 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT4O95628 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT4O95628 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 LINC00543-201ENST00000567234 1845 ntBASIC20.05■□□□□ 0.8
CNOT4O95628 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT4O95628 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.05■□□□□ 0.8
CNOT4O95628 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNOT4O95628 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT4O95628 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT4O95628 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT4O95628 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT4O95628 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT4O95628 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT4O95628 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT4O95628 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.04■□□□□ 0.8
CNOT4O95628 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT4O95628 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT4O95628 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.03■□□□□ 0.8
CNOT4O95628 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT4O95628 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CNOT4O95628 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.03■□□□□ 0.8
CNOT4O95628 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT4O95628 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CNOT4O95628 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT4O95628 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT4O95628 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT4O95628 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT4O95628 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.02■□□□□ 0.8
CNOT4O95628 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNOT4O95628 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT4O95628 AC093323.1-202ENST00000635031 2045 ntBASIC20.02■□□□□ 0.79
CNOT4O95628 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT4O95628 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT4O95628 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 MIR4466-201ENST00000606121 54 ntBASIC20.01■□□□□ 0.79
CNOT4O95628 AC110285.6-201ENST00000617652 491 ntBASIC20.01■□□□□ 0.79
CNOT4O95628 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT4O95628 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CNOT4O95628 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT4O95628 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 SRD5A1P1-201ENST00000442297 786 ntBASIC20■□□□□ 0.79
CNOT4O95628 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20■□□□□ 0.79
CNOT4O95628 AC005837.3-201ENST00000612163 286 ntBASIC20■□□□□ 0.79
CNOT4O95628 RASSF1-AS1-201ENST00000629828 790 ntBASIC20■□□□□ 0.79
CNOT4O95628 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 AL139125.2-201ENST00000623134 1869 ntBASIC20■□□□□ 0.79
CNOT4O95628 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNOT4O95628 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNOT4O95628 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT4O95628 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT4O95628 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT4O95628 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms