Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 AC127496.7-201ENST00000625110 1798 ntBASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 AC131274.2-201ENST00000580697 1507 ntBASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-5A0A0J9YX44 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-5A0A0J9YX44 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 MIR6765-201ENST00000614092 87 ntBASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRBV5-5A0A0J9YX44 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-5A0A0J9YX44 LONRF2P2-201ENST00000439212 571 ntBASIC19.72■□□□□ 0.75
TRBV5-5A0A0J9YX44 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRBV5-5A0A0J9YX44 RNF126P1-201ENST00000567452 1320 ntBASIC19.72■□□□□ 0.75
TRBV5-5A0A0J9YX44 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 AC011551.1-201ENST00000614101 683 ntBASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-5A0A0J9YX44 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 DUX4L9-201ENST00000449051 1259 ntBASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRBV5-5A0A0J9YX44 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 ESRRAP2-201ENST00000418437 1549 ntBASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-5A0A0J9YX44 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 AC137767.1-201ENST00000602918 1920 ntBASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-5A0A0J9YX44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms