Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 AC242852.2-201ENST00000615738 1807 ntBASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV13-2A0A0B4J235 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 AC008813.1-201ENST00000536597 885 ntBASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-2A0A0B4J235 MIR219A2-201ENST00000608502 1504 ntBASIC14.96□□□□□ -0.02
TRAV13-2A0A0B4J235 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
TRAV13-2A0A0B4J235 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRAV13-2A0A0B4J235 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV13-2A0A0B4J235 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV13-2A0A0B4J235 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 AC138932.1-201ENST00000534164 6830 ntBASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-2A0A0B4J235 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-2A0A0B4J235 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-2A0A0B4J235 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 ESRRAP2-201ENST00000418437 1549 ntBASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 DUX4L28-201ENST00000623687 678 ntBASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 AC148477.6-201ENST00000623746 465 ntBASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV13-2A0A0B4J235 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms