Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
MMP28Q9H239 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP28Q9H239 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP28Q9H239 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP28Q9H239 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP28Q9H239 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 ECEL1P1-201ENST00000373592 1742 ntBASIC19.95■□□□□ 0.78
MMP28Q9H239 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP28Q9H239 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.94■□□□□ 0.78
MMP28Q9H239 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.94■□□□□ 0.78
MMP28Q9H239 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP28Q9H239 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 DUSP8P3-201ENST00000399571 1760 ntBASIC19.94■□□□□ 0.78
MMP28Q9H239 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP28Q9H239 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP28Q9H239 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP28Q9H239 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MMP28Q9H239 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP28Q9H239 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
MMP28Q9H239 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP28Q9H239 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP28Q9H239 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP28Q9H239 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP28Q9H239 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP28Q9H239 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MMP28Q9H239 ECEL1P2-201ENST00000461596 1295 ntBASIC19.92■□□□□ 0.78
MMP28Q9H239 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP28Q9H239 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.92■□□□□ 0.78
MMP28Q9H239 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP28Q9H239 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP28Q9H239 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
MMP28Q9H239 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.91■□□□□ 0.78
MMP28Q9H239 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP28Q9H239 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
MMP28Q9H239 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP28Q9H239 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP28Q9H239 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP28Q9H239 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MMP28Q9H239 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP28Q9H239 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.91■□□□□ 0.78
MMP28Q9H239 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP28Q9H239 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP28Q9H239 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MMP28Q9H239 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP28Q9H239 ABHD17AP5-201ENST00000580133 923 ntBASIC19.9■□□□□ 0.78
MMP28Q9H239 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP28Q9H239 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP28Q9H239 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MMP28Q9H239 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP28Q9H239 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MMP28Q9H239 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP28Q9H239 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP28Q9H239 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP28Q9H239 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
MMP28Q9H239 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP28Q9H239 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP28Q9H239 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP28Q9H239 RNF126P1-201ENST00000567452 1320 ntBASIC19.89■□□□□ 0.77
MMP28Q9H239 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MMP28Q9H239 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP28Q9H239 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP28Q9H239 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP28Q9H239 SMPD5-203ENST00000639008 1464 ntBASIC19.88■□□□□ 0.77
MMP28Q9H239 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP28Q9H239 AC025884.2-201ENST00000553429 711 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms